The association rate constant for heme binding to globin is independent of protein structure

被引:209
作者
Hargrove, MS
Barrick, D
Olson, JS
机构
[1] RICE UNIV,DEPT BIOCHEM & CELL BIOL,HOUSTON,TX 77251
[2] RICE UNIV,WM KECK CTR COMPUTAT BIOL,HOUSTON,TX 77251
[3] UNIV OREGON,INST MOL BIOL,EUGENE,OR 97403
关键词
D O I
10.1021/bi960371l
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Rate constants for CO-heme binding to 35 different recombinant apomyoglobins and several other apoproteins were measured in an effort to understand the factors governing heme affinity and the velocity of the association reaction. Surprisingly, the rate constant for the binding of monomeric heme is approximate to 1 x 10(8) M(-1) s(-1) regardless of the structure or overall affinity of the apoprotein for iron-porphyrin. Major differences between the proteins are reflected primarily in the rates of dissociation of the prosthetic group. Slow phases observed in the reaction of CO heme with excess apomyoglobin result from formation of nonspecific heme-protein complexes which must dissociate before heme can bind specifically in the heme pocket. Once the specific heme-globin complex is formed, the heme pocket rapidly collapses around the porphyrin, simultaneously forming the bond between the proximal His(93) and the heme iron atom. The overall affinity of sperm whale apomyoglobin for hemin is similar to 1 x 10(14) M(-1). Nonspecific hydrophobic interactions between the porphyrin and the apolar heme cavity account for a factor of 10(5)-10(4). Covalent bond formation between Fe3+ and His(93)(F8) provides an additional factor of 10(3)-10(4). Specific interactions with conserved amino acids in the heme pocket contribute the final factor of 10(3)-10(4).
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页码:11293 / 11299
页数:7
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