Structural and biochemical analysis of the Obg GTP binding protein

被引:149
作者
Buglino, J [1 ]
Shen, V [1 ]
Hakimian, P [1 ]
Lima, CD [1 ]
机构
[1] Cornell Univ, Weill Med Coll, Dept Biochem, Struct Biol Program, New York, NY 10021 USA
关键词
D O I
10.1016/S0969-2126(02)00882-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Obg nucleotide binding protein family has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to man. Members of the family contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain. Structural analysis of Bacillus subtilis Obg revealed respective domain architectures and how they are coupled through the putative switch elements of the C-terminal GTPase domain in apo and nucleotide-bound configurations. Biochemical analysis of bacterial and human Obg proteins combined with the structural observation of the ppGpp nucleotide within the Obg active sight suggest a potential role for ppGpp modulation of Obg function in B. subtilis.
引用
收藏
页码:1581 / 1592
页数:12
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共 43 条
  • [1] Methods used in the structure determination of bovine mitochondrial F-1 ATPase
    Abrahams, JP
    Leslie, AGW
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1996, 52 : 30 - 42
  • [2] 3-DIMENSIONAL STRUCTURE OF THE RIBOSOMAL TRANSLOCASE - ELONGATION-FACTOR-G FROM THERMUS-THERMOPHILUS
    AEVARSSON, A
    BRAZHNIKOV, E
    GARBER, M
    ZHELTONOSOVA, J
    CHIRGADZE, Y
    AL-KARADAGHI, S
    SVENSSON, LA
    LILJAS, A
    [J]. EMBO JOURNAL, 1994, 13 (16) : 3669 - 3677
  • [3] THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY
    BAILEY, S
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 : 760 - 763
  • [4] BOURNE HR, 1991, NATURE, V349, P117, DOI 10.1038/349117a0
  • [5] THE GTPASE SUPERFAMILY - A CONSERVED SWITCH FOR DIVERSE CELL FUNCTIONS
    BOURNE, HR
    SANDERS, DA
    MCCORMICK, F
    [J]. NATURE, 1990, 348 (6297) : 125 - 132
  • [6] Crystallography & NMR system:: A new software suite for macromolecular structure determination
    Brunger, AT
    Adams, PD
    Clore, GM
    DeLano, WL
    Gros, P
    Grosse-Kunstleve, RW
    Jiang, JS
    Kuszewski, J
    Nilges, M
    Pannu, NS
    Read, RJ
    Rice, LM
    Simonson, T
    Warren, GL
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 : 905 - 921
  • [7] Evolution of a molecular switch: universal bacterial GTPases regulate ribosome function
    Caldon, CE
    Yoong, P
    March, PE
    [J]. MOLECULAR MICROBIOLOGY, 2001, 41 (02) : 289 - 297
  • [8] Revisiting the stringent response, ppGpp and starvation signaling
    Chatterji, D
    Ojha, AK
    [J]. CURRENT OPINION IN MICROBIOLOGY, 2001, 4 (02) : 160 - 165
  • [9] Crystal structure of ERA: A GTPase-dependent cell cycle regulator containing an RNA binding motif
    Chen, X
    Court, DL
    Ji, XH
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (15) : 8396 - 8401
  • [10] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods
    delaFortelle, E
    Bricogne, G
    [J]. MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 : 472 - 494