An Epithelial-Mesenchymal Transition Gene Signature Predicts Resistance to EGFR and PI3K Inhibitors and Identifies Axl as a Therapeutic Target for Overcoming EGFR Inhibitor Resistance

被引:862
作者
Byers, Lauren Averett [1 ]
Diao, Lixia [2 ]
Wang, Jing [2 ]
Saintigny, Pierre [1 ]
Girard, Luc [10 ,11 ]
Peyton, Michael [10 ,11 ]
Shen, Li [2 ]
Fan, Youhong [1 ]
Giri, Uma [1 ]
Tumula, Praveen K. [1 ]
Nilsson, Monique B. [1 ]
Gudikote, Jayanthi [1 ]
Tran, Hai [1 ]
Cardnell, Robert J. G. [1 ]
Bearss, David J. [12 ]
Warner, Steven L. [12 ]
Foulks, Jason M. [13 ]
Kanner, Steven B. [13 ]
Gandhi, Varsha [8 ]
Krett, Nancy [14 ]
Rosen, Steven T. [14 ]
Kim, Edward S. [1 ]
Herbst, Roy S. [1 ]
Blumenschein, George R. [1 ]
Lee, J. Jack [3 ]
Lippman, Scott M. [1 ]
Ang, K. Kian [4 ]
Mills, Gordon B. [5 ]
Hong, Waun K. [9 ]
Weinstein, John N. [2 ,5 ]
Wistuba, Ignacio I. [6 ]
Coombes, Kevin R. [2 ]
Minna, John D. [10 ,11 ]
Heymach, John V. [1 ,7 ]
机构
[1] Univ Texas MD Anderson Canc Ctr, Dept Thorac & Head & Neck Med Oncol, Houston, TX 77030 USA
[2] Univ Texas MD Anderson Canc Ctr, Dept Bioinformat & Computat Biol, Houston, TX 77030 USA
[3] Univ Texas MD Anderson Canc Ctr, Dept Biostat, Houston, TX 77030 USA
[4] Univ Texas MD Anderson Canc Ctr, Dept Radiat Oncol, Houston, TX 77030 USA
[5] Univ Texas MD Anderson Canc Ctr, Dept Syst Biol, Houston, TX 77030 USA
[6] Univ Texas MD Anderson Canc Ctr, Dept Pathol, Houston, TX 77030 USA
[7] Univ Texas MD Anderson Canc Ctr, Dept Canc Biol, Houston, TX 77030 USA
[8] Univ Texas MD Anderson Canc Ctr, Dept Expt Therapeut, Houston, TX 77030 USA
[9] Univ Texas MD Anderson Canc Ctr, Div Canc Med, Houston, TX 77030 USA
[10] Univ Texas SW, Hamon Ctr Therapeut Oncol Res, Dallas, TX USA
[11] Univ Texas SW, Simmons Canc Ctr, Dallas, TX USA
[12] Tolero Pharmaceut Inc, Salt Lake City, UT USA
[13] Astex Pharmaceut Inc, Salt Lake City, UT USA
[14] Northwestern Univ, Robert H Lurie Comprehens Canc Ctr, Chicago, IL 60611 USA
关键词
GROWTH-FACTOR RECEPTOR; CELL LUNG-CANCER; TRANSCRIPTION FACTOR SNAIL; E-CADHERIN EXPRESSION; EML4-ALK FUSION GENE; TUMOR-CELLS; KINASE INHIBITOR; SENSITIVITY; GEFITINIB; MUTATIONS;
D O I
10.1158/1078-0432.CCR-12-1558
中图分类号
R73 [肿瘤学];
学科分类号
100214 [肿瘤学];
摘要
Purpose: Epithelial-mesenchymal transition (EMT) has been associated with metastatic spread and EGF receptor (EGFR) inhibitor resistance. We developed and validated a robust 76-gene EMT signature using gene expression profiles from four platforms using non-small cell lung carcinoma (NSCLC) cell lines and patients treated in the Biomarker-Integrated Approaches of Targeted Therapy for Lung Cancer Elimination (BATTLE) study. Experimental Design: We conducted an integrated gene expression, proteomic, and drug response analysis using cell lines and tumors from patients with NSCLC. A 76-gene EMT signature was developed and validated using gene expression profiles from four microarray platforms of NSCLC cell lines and patients treated in the BATTLE study, and potential therapeutic targets associated with EMT were identified. Results: Compared with epithelial cells, mesenchymal cells showed significantly greater resistance to EGFR and PI3K/Akt pathway inhibitors, independent of EGFR mutation status, but more sensitivity to certain chemotherapies. Mesenchymal cells also expressed increased levels of the receptor tyrosine kinase Axl and showed a trend toward greater sensitivity to the Axl inhibitor SGI-7079, whereas the combination of SGI-7079 with erlotinib reversed erlotinib resistance in mesenchymal lines expressing Axl and in a xenograft model of mesenchymal NSCLC. In patients with NSCLC, the EMT signature predicted 8-week disease control in patients receiving erlotinib but not other therapies. Conclusion: We have developed a robust EMT signature that predicts resistance to EGFR and PI3K/Akt inhibitors, highlights different patterns of drug responsiveness for epithelial and mesenchymal cells, and identifies Axl as a potential therapeutic target for overcoming EGFR inhibitor resistance associated with the mesenchymal phenotype. Clin Cancer Res; 19(1); 279-90. (c) 2012 AACR.
引用
收藏
页码:279 / 290
页数:12
相关论文
共 44 条
[1]
The transcription factor Snail is a repressor of E-cadherin gene expression in epithelial tumour cells [J].
Batlle, E ;
Sancho, E ;
Franci, C ;
Domínguez, D ;
Monfar, M ;
Baulida, J ;
de Herreros, AG .
NATURE CELL BIOLOGY, 2000, 2 (02) :84-89
[2]
Epidermal growth factor receptor mutations and gene amplification in non-small-cell lung cancer: Molecular analysis of the IDEAL/INTACT gefitinib trials [J].
Bell, DW ;
Lynch, TJ ;
Haserlat, SM ;
Harris, PL ;
Okimoto, RA ;
Brannigan, BW ;
Sgroi, DC ;
Muir, B ;
Riemenschneider, MJ ;
Iacona, RB ;
Krebs, AD ;
Johnson, DH ;
Giaccone, G ;
Herbst, RS ;
Manegold, C ;
Fukuoka, M ;
Kris, MG ;
Baselga, J ;
Ochs, JS ;
Haber, DA .
JOURNAL OF CLINICAL ONCOLOGY, 2005, 23 (31) :8081-8092
[3]
Regulation of vimentin by SIP1 in human epithelial breast tumor cells [J].
Bindels, S. ;
Mestdagt, M. ;
Vandewalle, C. ;
Jacobs, N. ;
Volders, L. ;
Noel, A. ;
van Roy, F. ;
Berx, G. ;
Foidart, J-M ;
Gilles, C. .
ONCOGENE, 2006, 25 (36) :4975-4985
[4]
Reciprocal Regulation of c-Src and STAT3 in Non-Small Cell Lung Cancer [J].
Byers, Lauren Averett ;
Sen, Banibrata ;
Saigal, Babita ;
Diao, Lixia ;
Wang, Jing ;
Nanjundan, Meera ;
Cascone, Tina ;
Mills, Gordon B. ;
Heymach, John V. ;
Johnson, Faye M. .
CLINICAL CANCER RESEARCH, 2009, 15 (22) :6852-6861
[5]
The transcription factor Snail controls epithelial-mesenchymal transitions by repressing E-cadherin expression [J].
Cano, A ;
Pérez-Moreno, MA ;
Rodrigo, I ;
Locascio, A ;
Blanco, MJ ;
del Barrio, MG ;
Portillo, F ;
Nieto, MA .
NATURE CELL BIOLOGY, 2000, 2 (02) :76-83
[6]
Epidermal growth factor receptor gene and protein and gefitinib sensitivity in non-small-cell lung cancer [J].
Cappuzzo, F ;
Hirsch, FR ;
Rossi, E ;
Bartolini, S ;
Ceresoli, GL ;
Bemis, L ;
Haney, J ;
Witta, S ;
Danenberg, K ;
Domenichini, I ;
Ludovini, V ;
Magrini, E ;
Gregorc, V ;
Doglioni, C ;
Sidoni, A ;
Tonato, M ;
Franklin, WA ;
Crino, L ;
Bunn, PA ;
Varella-Garcia, M .
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2005, 97 (09) :643-655
[7]
QUANTITATIVE-ANALYSIS OF DOSE-EFFECT RELATIONSHIPS - THE COMBINED EFFECTS OF MULTIPLE-DRUGS OR ENZYME-INHIBITORS [J].
CHOU, TC ;
TALALAY, P .
ADVANCES IN ENZYME REGULATION, 1984, 22 :27-55
[8]
The transcription factor snail induces tumor cell invasion through modulation of the epithelial cell differentiation program [J].
De Craene, B ;
Gilbert, B ;
Stove, C ;
Bruyneel, E ;
van Roy, F ;
Berx, G .
CANCER RESEARCH, 2005, 65 (14) :6237-6244
[9]
8-Aminoadenosine inhibits Akt/mTOR and Erk signaling in mantle cell lymphoma [J].
Dennison, Jennifer B. ;
Shanmugam, Mala ;
Ayres, Mary L. ;
Qian, Jun ;
Krett, Nancy L. ;
Medeiros, L. Jeffrey ;
Neelapu, Sattva S. ;
Rosen, Steven T. ;
Gandhi, Varsha .
BLOOD, 2010, 116 (25) :5622-5630
[10]
Mutations in the epidermal growth factor receptor and in KRAS are predictive and prognostic indicators in patients with non-small-cell lung cancer treated with chemotherapy alone and in combination with erlotinib [J].
Eberhard, DA ;
Johnson, BE ;
Amler, LC ;
Goddard, AD ;
Heldens, SL ;
Herbst, RS ;
Ince, WL ;
Jänne, PA ;
Januario, T ;
Johnson, DH ;
Klein, P ;
Miller, VA ;
Ostland, MA ;
Ramies, DA ;
Sebisanovic, D ;
Stinson, JA ;
Zhang, YR ;
Seshagiri, S ;
Hillan, KJ .
JOURNAL OF CLINICAL ONCOLOGY, 2005, 23 (25) :5900-5909