Vitamin D receptor signaling mechanisms: Integrated actions of a well-defined transcription factor

被引:215
作者
Carlberg, Carsten [1 ]
Campbell, Moray J. [2 ]
机构
[1] Univ Eastern Finland, Inst Biomed, Sch Med, FIN-70210 Kuopio, Finland
[2] Roswell Pk Canc Inst, Dept Pharmacol & Therapeut, Buffalo, NY 14263 USA
基金
芬兰科学院;
关键词
Chromatin; Gene regulation; Genome-wide view; Nuclear receptor; Vitamin D; Vitamin D receptor; HORMONE; 1-ALPHA; 25-DIHYDROXYVITAMIN D-3; NUCLEAR RECEPTOR; GENE-EXPRESSION; 1,25-DIHYDROXYVITAMIN D-3; RESPONSE ELEMENTS; FEEDFORWARD LOOP; THYROID-HORMONE; GLUCOCORTICOID-RECEPTOR; CHROMATIN-STRUCTURE; MOLECULAR ACTIONS;
D O I
10.1016/j.steroids.2012.10.019
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The main physiological actions of the biologically most active metabolite of vitamin D, 1 alpha,25-dihydroxyvitamin D-3 (1 alpha,25(OH)(2)D-3), are calcium and phosphorus uptake and transport and thereby controlling bone formation. Other emergent areas of 1 alpha,25(OH)(2)D-3 action are in the control of immune functions, cellular growth and differentiation. All genomic actions of 1 alpha,25(OH)(2)D-3 are mediated by the transcription factor vitamin D receptor (VDR) that has been the subject of intense study since the 1980's. Thus, vitamin D signaling primarily implies the molecular actions of the VDR. In this review, we present different perspectives on the VDR that incorporate its role as transcription factor and member of the nuclear receptor superfamily, its dynamic changes in genome-wide locations and DNA binding modes, its interaction with chromatin components and its primary protein-coding and non-protein coding target genes and finally how these aspects are united in regulatory networks. By comparing the actions of the VDR, a relatively well-understood and characterized protein, with those of other transcription factors, we aim to build a realistic positioning of vitamin D signaling in the context of other intracellular signaling systems. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:127 / 136
页数:10
相关论文
共 112 条
[1]   Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses [J].
Amit, Ido ;
Garber, Manuel ;
Chevrier, Nicolas ;
Leite, Ana Paula ;
Donner, Yoni ;
Eisenhaure, Thomas ;
Guttman, Mitchell ;
Grenier, Jennifer K. ;
Li, Weibo ;
Zuk, Or ;
Schubert, Lisa A. ;
Birditt, Brian ;
Shay, Tal ;
Goren, Alon ;
Zhang, Xiaolan ;
Smith, Zachary ;
Deering, Raquel ;
McDonald, Rebecca C. ;
Cabili, Moran ;
Bernstein, Bradley E. ;
Rinn, John L. ;
Meissner, Alex ;
Root, David E. ;
Hacohen, Nir ;
Regev, Aviv .
SCIENCE, 2009, 326 (5950) :257-263
[2]   Nuclear hormone receptors and gene expression [J].
Aranda, A ;
Pascual, A .
PHYSIOLOGICAL REVIEWS, 2001, 81 (03) :1269-1304
[3]   Vitamin D: modulator of the immune system [J].
Baeke, Femke ;
Takiishi, Tatiana ;
Korf, Hannelie ;
Gysemans, Conny ;
Mathieu, Chantal .
CURRENT OPINION IN PHARMACOLOGY, 2010, 10 (04) :482-496
[4]   CLONING AND EXPRESSION OF FULL-LENGTH CDNA-ENCODING HUMAN VITAMIN-D RECEPTOR [J].
BAKER, AR ;
MCDONNELL, DP ;
HUGHES, M ;
CRISP, TM ;
MANGELSDORF, DJ ;
HAUSSLER, MR ;
PIKE, JW ;
SHINE, J ;
OMALLEY, BW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (10) :3294-3298
[5]   INTERACTION OF HUMAN THYROID-HORMONE RECEPTOR-BETA WITH TRANSCRIPTION FACTOR TFIIB MAY MEDIATE TARGET GENE DEREPRESSION AND ACTIVATION BY THYROID-HORMONE [J].
BANIAHMAD, A ;
HA, I ;
REINBERG, D ;
TSAI, S ;
TSAI, MJ ;
OMALLEY, BW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (19) :8832-8836
[6]   Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project [J].
Birney, Ewan ;
Stamatoyannopoulos, John A. ;
Dutta, Anindya ;
Guigo, Roderic ;
Gingeras, Thomas R. ;
Margulies, Elliott H. ;
Weng, Zhiping ;
Snyder, Michael ;
Dermitzakis, Emmanouil T. ;
Stamatoyannopoulos, John A. ;
Thurman, Robert E. ;
Kuehn, Michael S. ;
Taylor, Christopher M. ;
Neph, Shane ;
Koch, Christoph M. ;
Asthana, Saurabh ;
Malhotra, Ankit ;
Adzhubei, Ivan ;
Greenbaum, Jason A. ;
Andrews, Robert M. ;
Flicek, Paul ;
Boyle, Patrick J. ;
Cao, Hua ;
Carter, Nigel P. ;
Clelland, Gayle K. ;
Davis, Sean ;
Day, Nathan ;
Dhami, Pawandeep ;
Dillon, Shane C. ;
Dorschner, Michael O. ;
Fiegler, Heike ;
Giresi, Paul G. ;
Goldy, Jeff ;
Hawrylycz, Michael ;
Haydock, Andrew ;
Humbert, Richard ;
James, Keith D. ;
Johnson, Brett E. ;
Johnson, Ericka M. ;
Frum, Tristan T. ;
Rosenzweig, Elizabeth R. ;
Karnani, Neerja ;
Lee, Kirsten ;
Lefebvre, Gregory C. ;
Navas, Patrick A. ;
Neri, Fidencio ;
Parker, Stephen C. J. ;
Sabo, Peter J. ;
Sandstrom, Richard ;
Shafer, Anthony .
NATURE, 2007, 447 (7146) :799-816
[7]   Vitamin D and Human Health: Lessons from Vitamin D Receptor Null Mice [J].
Bouillon, Roger ;
Carmeliet, Geert ;
Verlinden, Lieve ;
van Etten, Evelyne ;
Verstuyf, Annemieke ;
Luderer, Hilary F. ;
Lieben, Liesbet ;
Mathieu, Chantal ;
Demay, Marie .
ENDOCRINE REVIEWS, 2008, 29 (06) :726-776
[8]   p53-repressed miRNAs are involved with E2F in a feed-forward loop promoting proliferation [J].
Brosh, Ran ;
Shalgi, Reut ;
Liran, Atar ;
Landan, Gilad ;
Korotayev, Katya ;
Nguyen, Giang Huong ;
Enerly, Espen ;
Johnsen, Hilde ;
Buganim, Yosef ;
Solomon, Hilla ;
Goldstein, Ido ;
Madar, Shalom ;
Goldfinger, Naomi ;
Brresen-Dale, Anne-Lise ;
Ginsberg, Doron ;
Harris, Curtis C. ;
Pilpel, Yitzhak ;
Oren, Moshe ;
Rotter, Varda .
MOLECULAR SYSTEMS BIOLOGY, 2008, 4 (1)
[9]   CYTOPLASMIC AND NUCLEAR BINDING COMPONENTS FOR 1 ALPHA,25-DIHYDROXYVITAMIN-D3 IN CHICK PARATHYROID-GLANDS [J].
BRUMBAUGH, PF ;
HUGHES, MR ;
HAUSSLER, MR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1975, 72 (12) :4871-4875
[10]   Molecular basis of agonism and antagonism in the oestrogen receptor [J].
Brzozowski, AM ;
Pike, ACW ;
Dauter, Z ;
Hubbard, RE ;
Bonn, T ;
Engstrom, O ;
Ohman, L ;
Greene, GL ;
Gustafsson, JA ;
Carlquist, M .
NATURE, 1997, 389 (6652) :753-758