Can the exome and the immunome converge on the design of efficient cancer vaccines?

被引:18
作者
Kroemer, Guido [1 ,2 ,3 ,4 ,5 ]
Zitvogel, Laurence [6 ,7 ,8 ,9 ]
机构
[1] INSERM, U848, Villejuif, France
[2] Inst Gustave Roussy, Metabol Platform, Villejuif, France
[3] Ctr Rech Cordeliers, Paris, France
[4] Hop Europeen Georges Pompidou, AP HP, Pole Biol, Paris, France
[5] Univ Paris 05, Fac Med, Paris, France
[6] Inst Gustave Roussy, Villejuif, France
[7] Inst Gustave Roussy, INSERM, U1015, F-94805 Villejuif, France
[8] IGR, Ctr Clin Invest CBT507, Villejuif, France
[9] Univ Paris 11, Villejuif, France
来源
ONCOIMMUNOLOGY | 2012年 / 1卷 / 05期
关键词
CDNA LIBRARIES; ANTIGENS; REVEALS; GENOME;
D O I
10.4161/onci.20730
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Human cancers carry hundreds of non-synonymous mutations, several dozens among which may lead to the generation of tumor-specific MHC Class I-restricted epitopes. Hence every patient's tumor harbors a highly specific mutational and antigenic signature and up to 95% of these mutations are unique. This "mutanome" can be identified by deep sequencing and can be subjected to systematic analyses of the immunogenicity of mutated proteins/peptides. We anticipate that this approach will lead to individualized immunotherapies by means of tailored vaccines.
引用
收藏
页码:579 / 580
页数:2
相关论文
共 13 条
[1]   Exploiting the Mutanome for Tumor Vaccination [J].
Castle, John C. ;
Kreiter, Sebastian ;
Diekmann, Jan ;
Loewer, Martin ;
Van de Roemer, Niels ;
de Graaf, Jos ;
Selmi, Abderraouf ;
Diken, Mustafa ;
Boegel, Sebastian ;
Paret, Claudia ;
Koslowski, Michael ;
Kuhn, Andreas N. ;
Britten, Cedrik M. ;
Huber, Christoph ;
Tuereci, Oezlem ;
Sahin, Ugur .
CANCER RESEARCH, 2012, 72 (05) :1081-1091
[2]   The Prioritization of Cancer Antigens: A National Cancer Institute Pilot Project for the Acceleration of Translational Research [J].
Cheever, Martin A. ;
Allison, James P. ;
Ferris, Andrea S. ;
Finn, Olivera J. ;
Hastings, Benjamin M. ;
Hecht, Toby T. ;
Mellman, Ira ;
Prindiville, Sheila A. ;
Viner, Jaye L. ;
Weiner, Louis M. ;
Matrisian, Lynn M. .
CLINICAL CANCER RESEARCH, 2009, 15 (17) :5323-5337
[3]   Expression of tumour-specific antigens underlies cancer immunoediting [J].
DuPage, Michel ;
Mazumdar, Claire ;
Schmidt, Leah M. ;
Cheung, Ann F. ;
Jacks, Tyler .
NATURE, 2012, 482 (7385) :405-U1512
[4]   Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing [J].
Gerlinger, Marco ;
Rowan, Andrew J. ;
Horswell, Stuart ;
Larkin, James ;
Endesfelder, David ;
Gronroos, Eva ;
Martinez, Pierre ;
Matthews, Nicholas ;
Stewart, Aengus ;
Tarpey, Patrick ;
Varela, Ignacio ;
Phillimore, Benjamin ;
Begum, Sharmin ;
McDonald, Neil Q. ;
Butler, Adam ;
Jones, David ;
Raine, Keiran ;
Latimer, Calli ;
Santos, Claudio R. ;
Nohadani, Mahrokh ;
Eklund, Aron C. ;
Spencer-Dene, Bradley ;
Clark, Graham ;
Pickering, Lisa ;
Stamp, Gordon ;
Gore, Martin ;
Szallasi, Zoltan ;
Downward, Julian ;
Futreal, P. Andrew ;
Swanton, Charles .
NEW ENGLAND JOURNAL OF MEDICINE, 2012, 366 (10) :883-892
[5]   Broad antigenic coverage induced by vaccination with virus-based cDNA libraries cures established tumors [J].
Kottke, Timothy ;
Errington, Fiona ;
Pulido, Jose ;
Galivo, Feorillo ;
Thompson, Jill ;
Wongthida, Phonphimon ;
Diaz, Rosa Maria ;
Chong, Heung ;
Ilett, Elizabeth ;
Chester, John ;
Pandha, Hardev ;
Harrington, Kevin ;
Selby, Peter ;
Melcher, Alan ;
Vile, Richard .
NATURE MEDICINE, 2011, 17 (07) :854-U223
[6]   A Modified Method for Whole Exome Resequencing from Minimal Amounts of Starting DNA [J].
Kozarewa, Iwanka ;
Rosa-Rosa, Juan Manuel ;
Wardell, Christopher P. ;
Walker, Brian A. ;
Fenwick, Kerry ;
Assiotis, Ioannis ;
Mitsopoulos, Costas ;
Zvelebil, Marketa ;
Morgan, Gareth J. ;
Ashworth, Alan ;
Lord, Christopher J. .
PLOS ONE, 2012, 7 (03)
[7]   The mutation spectrum revealed by paired genome sequences from a lung cancer patient [J].
Lee, William ;
Jiang, Zhaoshi ;
Liu, Jinfeng ;
Haverty, Peter M. ;
Guan, Yinghui ;
Stinson, Jeremy ;
Yue, Peng ;
Zhang, Yan ;
Pant, Krishna P. ;
Bhatt, Deepali ;
Ha, Connie ;
Johnson, Stephanie ;
Kennemer, Michael I. ;
Mohan, Sankar ;
Nazarenko, Igor ;
Watanabe, Colin ;
Sparks, Andrew B. ;
Shames, David S. ;
Gentleman, Robert ;
de Sauvage, Frederic J. ;
Stern, Howard ;
Pandita, Ajay ;
Ballinger, Dennis G. ;
Drmanac, Radoje ;
Modrusan, Zora ;
Seshagiri, Somasekar ;
Zhang, Zemin .
NATURE, 2010, 465 (7297) :473-477
[8]   Cancer exome analysis reveals a T-cell-dependent mechanism of cancer immunoediting [J].
Matsushita, Hirokazu ;
Vesely, Matthew D. ;
Koboldt, Daniel C. ;
Rickert, Charles G. ;
Uppaluri, Ravindra ;
Magrini, Vincent J. ;
Arthur, Cora D. ;
White, J. Michael ;
Chen, Yee-Shiuan ;
Shea, Lauren K. ;
Hundal, Jasreet ;
Wendl, Michael C. ;
Demeter, Ryan ;
Wylie, Todd ;
Allison, James P. ;
Smyth, Mark J. ;
Old, Lloyd J. ;
Mardis, Elaine R. ;
Schreiber, Robert D. .
NATURE, 2012, 482 (7385) :400-U149
[9]   A small-cell lung cancer genome with complex signatures of tobacco exposure [J].
Pleasance, Erin D. ;
Stephens, Philip J. ;
O'Meara, Sarah ;
McBride, David J. ;
Meynert, Alison ;
Jones, David ;
Lin, Meng-Lay ;
Beare, David ;
Lau, King Wai ;
Greenman, Chris ;
Varela, Ignacio ;
Nik-Zainal, Serena ;
Davies, Helen R. ;
Ordonez, Gonzalo R. ;
Mudie, Laura J. ;
Latimer, Calli ;
Edkins, Sarah ;
Stebbings, Lucy ;
Chen, Lina ;
Jia, Mingming ;
Leroy, Catherine ;
Marshall, John ;
Menzies, Andrew ;
Butler, Adam ;
Teague, Jon W. ;
Mangion, Jonathon ;
Sun, Yongming A. ;
McLaughlin, Stephen F. ;
Peckham, Heather E. ;
Tsung, Eric F. ;
Costa, Gina L. ;
Lee, Clarence C. ;
Minna, John D. ;
Gazdar, Adi ;
Birney, Ewan ;
Rhodes, Michael D. ;
McKernan, Kevin J. ;
Stratton, Michael R. ;
Futreal, P. Andrew ;
Campbell, Peter J. .
NATURE, 2010, 463 (7278) :184-U66
[10]   Using virally expressed melanoma cDNA libraries to identify tumor-associated antigens that cure melanoma [J].
Pulido, Jose ;
Kottke, Timothy ;
Thompson, Jill ;
Galivo, Feorillo ;
Wongthida, Phonphimon ;
Diaz, Rosa Maria ;
Rommelfanger, Diana ;
Ilett, Elizabeth ;
Pease, Larry ;
Pandha, Hardev ;
Harrington, Kevin ;
Selby, Peter ;
Melcher, Alan ;
Vile, Richard .
NATURE BIOTECHNOLOGY, 2012, 30 (04) :336-343