New insights into the classification and nomenclature of cortical GABAergic interneurons

被引:568
作者
DeFelipe, Javier [1 ,2 ]
Lopez-Cruz, Pedro L. [3 ]
Benavides-Piccione, Ruth [1 ,2 ]
Bielza, Concha [3 ]
Larranaga, Pedro [3 ]
Anderson, Stewart [5 ]
Burkhalter, Andreas [6 ]
Cauli, Bruno [7 ]
Fairen, Alfonso [8 ,9 ]
Feldmeyer, Dirk [10 ,11 ]
Fishell, Gord [12 ]
Fitzpatrick, David [13 ]
Freund, Tamas F. [14 ]
Gonzalez-Burgos, Guillermo [15 ]
Hestrin, Shaul [16 ]
Hill, Sean [17 ]
Hof, Patrick R. [18 ,19 ]
Huang, Josh [20 ]
Jones, Edward G.
Kawaguchi, Yasuo [21 ]
Kisvarday, Zoltan [22 ]
Kubota, Yoshiyuki [21 ]
Lewis, David A. [15 ]
Marin, Oscar [8 ,9 ]
Markram, Henry [17 ]
McBain, Chris J. [23 ]
Meyer, Hanno S. [24 ]
Monyer, Hannah [25 ,26 ]
Nelson, Sacha B. [27 ,28 ]
Rockland, Kathleen [29 ]
Rossier, Jean [30 ]
Rubenstein, John L. R. [31 ]
Rudy, Bernardo [32 ]
Scanziani, Massimo [33 ]
Shepherd, Gordon M. [34 ]
Sherwood, Chet C. [35 ,36 ]
Staiger, Jochen F. [37 ]
Tamas, Gabor [38 ]
Thomson, Alex [39 ]
Wang, Yun [40 ,41 ]
Yuste, Rafael [42 ]
Ascoli, Giorgio A. [4 ]
机构
[1] Univ Politecn Madrid, CTB, Lab Cajal Circuitos Cort, Madrid 28223, Spain
[2] CSIC, Inst Cajal, E-28002 Madrid, Spain
[3] Univ Politecn Madrid, Dept Inteligencia Artificial, E-28660 Madrid, Spain
[4] George Mason Univ, Krasnow Inst Adv Study MS2A1, Mol Neurosci Dept, Ctr Neural Informat Struct & Plast, Fairfax, VA 22030 USA
[5] Univ Penn, Sch Med, Childrens Hosp Philadelphia, Philadelphia, PA 19104 USA
[6] Washington Univ, Sch Med, Dept Anat & Neurobiol, St Louis, MO 63110 USA
[7] Univ Paris 06, Reseau Cort & Couplage Neurovasc, Lab Neurobiol Proc Adaptatifs, UMR 7102,CNRS, F-75005 Paris, France
[8] CSIC, Inst Neurociencias, Alicante 03550, Spain
[9] Univ Miguel Hernandez, Alicante 03550, Spain
[10] Forschungszentrum Julich, Inst Neurosci & Med, INM 2, Funct Neuronal Microcircuits Grp, D-52425 Julich, Germany
[11] Univ Aachen, Rhein Westfal TH Aachen, Dept Psychiat & Psychotherapy, D-52074 Aachen, Germany
[12] NYU, Langone Med Ctr, Dept Neurosci & Physiol, Inst Neurosci, New York, NY 10016 USA
[13] Max Planck Florida Inst Neurosci, Jupiter, FL 33468 USA
[14] Hungarian Acad Sci, Inst Expt Med, H-1083 Budapest, Hungary
[15] Univ Pittsburgh, Sch Med, Dept Psychiat, Pittsburgh, PA 15261 USA
[16] Stanford Univ, Sch Med, Dept Comparat Med, Stanford, CA 94305 USA
[17] Ecole Polytech Fed Lausanne, Brain Mind Inst, CH-1015 Lausanne, Switzerland
[18] Icahn Sch Med Mt Sinai, Fishberg Dept Neurosci, New York, NY 10029 USA
[19] Icahn Sch Med Mt Sinai, Friedman Brain Inst, New York, NY 10029 USA
[20] Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
[21] Natl Inst Physiol Sci, Div Cerebral Circuitry, Okazaki, Aichi 4448787, Japan
[22] Univ Debrecen, Dept Anat Histol & Embryol, Debrecen, Hungary
[23] Eunice Kennedy Shriver Natl Inst Child Hlth & Hum, Bethesda, MD 20892 USA
[24] Tech Univ Munich, Dept Neurosurg, D-81675 Munich, Germany
[25] Univ Heidelberg Hosp, Dept Clin Neurobiol, D-69120 Heidelberg, Germany
[26] German Canc Res Ctr DKFZ Heidelberg, D-69120 Heidelberg, Germany
[27] Brandeis Univ, Dept Biol, Waltham, MA 02454 USA
[28] Brandeis Univ, Ctr Behav Genom, Waltham, MA 02454 USA
[29] Boston Univ, Sch Med, Dept Anat & Neurobiol, Boston, MA 02118 USA
[30] Hop St Anne, INSERM, CPN, U894, F-75014 Paris, France
[31] Univ Calif San Francisco, San Francisco, CA 94143 USA
[32] NYU, New York, NY 10016 USA
[33] Univ Calif San Diego, Howard Hughes Med Inst, Neurobiol Sect, Div Biol, La Jolla, CA 92093 USA
[34] Yale Univ, Sch Med, Dept Neurosci, New Haven, CT 06520 USA
[35] George Washington Univ, Ctr Adv Study Hominid Paleobiol, Dept Anthropol, Washington, DC 20052 USA
[36] George Washington Univ, GW Inst Neurosci, Washington, DC 20052 USA
[37] Univ Gottingen, Zentrum Anat, Abt Neuroanat, D-37075 Gottingen, Germany
[38] Univ Szeged, Dept Physiol Anat & Neurosci, H-6726 Szeged, Hungary
[39] UCL, Sch Pharm, Dept Pharmacol, London WC1N 1AX, England
[40] Wenzhou Med Coll, Sch Optometry & Ophthalmol, Wenzhou 325027, Zhejiang, Peoples R China
[41] Tufts Med Sch, Steward St Elizabeths Med Ctr, Boston, MA 02135 USA
[42] Columbia Univ, Howard Hughes Med Inst, New York, NY 10027 USA
基金
美国国家卫生研究院;
关键词
CAJAL-RETZIUS CELLS; NEURONS; MOUSE; NEUROSCIENCE; INHIBITION; NEOCORTEX; ORIGINS;
D O I
10.1038/nrn3444
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
A systematic classification and accepted nomenclature of neuron types is much needed but is currently lacking. This article describes a possible taxononnical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based interactive system that allows experts to classify neurons with pre-determined criteria. Using Bayesian analysis and clustering algorithms on the resulting data, we investigated the suitability of several anatomical terms and neuron names for cortical GABAergic interneurons. Moreover, we show that supervised classification models could automatically categorize interneurons in agreement with experts' assignments. These results demonstrate a practical and objective approach to the naming, characterization and classification of neurons based on community consensus.
引用
收藏
页码:202 / 216
页数:15
相关论文
共 42 条
[1]  
Amaral D, 2006, HIPPOCAMPUS BOOK, P37
[2]  
[Anonymous], LOCAL CIRCUIT NEURON
[3]  
[Anonymous], 1892, Rev. Ciencias Med. Barcelona
[4]  
[Anonymous], 2000, Pattern Classification
[5]   Mobilizing the base of neuroscience data: the case of neuronal morphologies [J].
Ascoli, GA .
NATURE REVIEWS NEUROSCIENCE, 2006, 7 (04) :318-324
[6]   Petilla terminology:: nomenclature of features of GABAergic interneurons of the cerebral cortex [J].
Ascoli, Giorgio A. ;
Alonso-Nanclares, Lidia ;
Anderson, Stewart A. ;
Barrionuevo, German ;
Benavides-Piccione, Ruth ;
Burkhalter, Andreas ;
Buzsaki, Gyoergy ;
Cauli, Bruno ;
DeFelipe, Javier ;
Fairen, Alfonso ;
Feldmeyer, Dirk ;
Fishell, Gord ;
Fregnac, Yves ;
Freund, Tamas F. ;
Gardner, Daniel ;
Gardner, Esther P. ;
Goldberg, Jesse H. ;
Helmstaedter, Moritz ;
Hestrin, Shaul ;
Karube, Fuyuki ;
Kisvarday, Zoltan F. ;
Lambolez, Bertrand ;
Lewis, David A. ;
Marin, Oscar ;
Markram, Henry ;
Munoz, Alberto ;
Packer, Adam ;
Petersen, Carl C. H. ;
Rockland, Kathleen S. ;
Rossier, Jean ;
Rudy, Bernardo ;
Somogyi, Peter ;
Staiger, Jochen F. ;
Tamas, Gabor ;
Thomson, Alex M. ;
Toledo-Rodriguez, Maria ;
Wang, Yun ;
West, David C. ;
Yuste, Rafael .
NATURE REVIEWS NEUROSCIENCE, 2008, 9 (07) :557-568
[7]   NeuroMorpho.Org: A central resource for neuronal morphologies [J].
Ascoli, Giorgio A. ;
Donohue, Duncan E. ;
Halavi, Maryam .
JOURNAL OF NEUROSCIENCE, 2007, 27 (35) :9247-9251
[8]  
Berlin R., 1858, BEITRAG ZUR STRUKTUR
[9]   Fate of Cajal-Retzius neurons in the postnatal mouse neocortex [J].
Chowdhury, Tara G. ;
Jimenez, Jessica C. ;
Bomar, Jamee M. ;
Cruz-Martin, Alberto ;
Cantle, Jeffrey P. ;
Portera-Cailliau, Carlos .
FRONTIERS IN NEUROANATOMY, 2010, 4
[10]  
Clarke E., 1968, THE HUMAN BRAIN AND