Rare TP53 genetic variant associated with glioma risk and outcome

被引:34
作者
Egan, Kathleen M. [1 ]
Nabors, L. Burton [2 ]
Olson, Jeffrey J. [3 ]
Monteiro, Alvaro N.
Browning, James E. [1 ]
Madden, Melissa H. [1 ]
Thompson, Reid C. [4 ]
机构
[1] H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Epidemiol, Tampa, FL 33612 USA
[2] Univ Alabama Birmingham, Neurooncol Program, Birmingham, AL USA
[3] Emory Sch Med, Dept Neurosurg, Atlanta, GA USA
[4] Vanderbilt Univ, Med Ctr, Dept Neurol Surg, Nashville, TN USA
基金
美国国家卫生研究院;
关键词
CANCER;
D O I
10.1136/jmedgenet-2012-100941
中图分类号
Q3 [遗传学];
学科分类号
071007 [遗传学];
摘要
Validation of a recent finding linking a rare variant in TP53 to the risk of glioma, the most common primary brain tumour, is reported here. This study genotyped the single nucleotide polymorphism (SNP) rs78378222 in 566 glioma cases and 603 controls. The variant 'C' allele (with an allelic frequency of 1.1% in controls) was associated with a 3.5-fold excess in glioma risk (odds ratio 3.54; p=0.0001). Variant carriers had significantly improved survival (hazard ratio 0.52; p=0.009) when compared to non-carriers. The rs78378222 SNP is the first confirmed rare susceptibility variant in glioma. Results may shed light on the aetiology and progression of these tumours.
引用
收藏
页码:420 / 421
页数:2
相关论文
共 6 条
[1]
Rare genetic variants and the risk of cancer [J].
Bodmer, Walter ;
Tomlinson, Ian .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2010, 20 (03) :262-267
[2]
Comprehensive genomic characterization defines human glioblastoma genes and core pathways [J].
Chin, L. ;
Meyerson, M. ;
Aldape, K. ;
Bigner, D. ;
Mikkelsen, T. ;
VandenBerg, S. ;
Kahn, A. ;
Penny, R. ;
Ferguson, M. L. ;
Gerhard, D. S. ;
Getz, G. ;
Brennan, C. ;
Taylor, B. S. ;
Winckler, W. ;
Park, P. ;
Ladanyi, M. ;
Hoadley, K. A. ;
Verhaak, R. G. W. ;
Hayes, D. N. ;
Spellman, Paul T. ;
Absher, D. ;
Weir, B. A. ;
Ding, L. ;
Wheeler, D. ;
Lawrence, M. S. ;
Cibulskis, K. ;
Mardis, E. ;
Zhang, Jinghui ;
Wilson, R. K. ;
Donehower, L. ;
Wheeler, D. A. ;
Purdom, E. ;
Wallis, J. ;
Laird, P. W. ;
Herman, J. G. ;
Schuebel, K. E. ;
Weisenberger, D. J. ;
Baylin, S. B. ;
Schultz, N. ;
Yao, Jun ;
Wiedemeyer, R. ;
Weinstein, J. ;
Sander, C. ;
Gibbs, R. A. ;
Gray, J. ;
Kucherlapati, R. ;
Lander, E. S. ;
Myers, R. M. ;
Perou, C. M. ;
McLendon, Roger .
NATURE, 2008, 455 (7216) :1061-1068
[3]
Rare Variants Create Synthetic Genome-Wide Associations [J].
Dickson, Samuel P. ;
Wang, Kai ;
Krantz, Ian ;
Hakonarson, Hakon ;
Goldstein, David B. .
PLOS BIOLOGY, 2010, 8 (01)
[4]
Cancer susceptibility variants and the risk of adult glioma in a US case-control study [J].
Egan, Kathleen M. ;
Thompson, Reid C. ;
Nabors, L. B. ;
Olson, Jeffrey J. ;
Brat, Daniel J. ;
LaRocca, Renato V. ;
Brem, Steven ;
Moots, Paul L. ;
Madden, Melissa H. ;
Browning, James E. ;
Chen, Y. Ann .
JOURNAL OF NEURO-ONCOLOGY, 2011, 104 (02) :535-542
[5]
Evolutionary evidence of the effect of rare variants on disease etiology [J].
Gorlov, I. P. ;
Gorlova, O. Y. ;
Frazier, M. L. ;
Spitz, M. R. ;
Amos, C. I. .
CLINICAL GENETICS, 2011, 79 (03) :199-206
[6]
A germline variant in the TP53 polyadenylation signal confers cancer susceptibility [J].
Stacey, Simon N. ;
Sulem, Patrick ;
Jonasdottir, Aslaug ;
Masson, Gisli ;
Gudmundsson, Julius ;
Gudbjartsson, Daniel F. ;
Magnusson, Olafur T. ;
Gudjonsson, Sigurjon A. ;
Sigurgeirsson, Bardur ;
Thorisdottir, Kristin ;
Ragnarsson, Rafn ;
Benediktsdottir, Kristrun R. ;
Nexo, Bjorn A. ;
Tjonneland, Anne ;
Overvad, Kim ;
Rudnai, Peter ;
Gurzau, Eugene ;
Koppova, Kvetoslava ;
Hemminki, Kari ;
Corredera, Cristina ;
Fuentelsaz, Victoria ;
Grasa, Pilar ;
Navarrete, Sebastian ;
Fuertes, Fernando ;
Garcia-Prats, Maria D. ;
Sanambrosio, Enrique ;
Panadero, Angeles ;
De Juan, Ana ;
Garcia, Almudena ;
Rivera, Fernando ;
Planelles, Dolores ;
Soriano, Virtudes ;
Requena, Celia ;
Aben, Katja K. ;
van Rossum, Michelle M. ;
Cremers, Ruben G. H. M. ;
van Oort, Inge M. ;
van Spronsen, Dick-Johan ;
Schalken, Jack A. ;
Peters, Wilbert H. M. ;
Helfand, Brian T. ;
Donovan, Jenny L. ;
Hamdy, Freddie C. ;
Badescu, Daniel ;
Codreanu, Ovidiu ;
Jinga, Mariana ;
Csiki, Irma E. ;
Constantinescu, Vali ;
Badea, Paula ;
Mates, Ioan N. .
NATURE GENETICS, 2011, 43 (11) :1098-U85