DNA barcoding detects market substitution in North American seafood

被引:364
作者
Wong, Eugene H. -K. [1 ]
Hanner, Robert H. [1 ]
机构
[1] Univ Guelph, Dept Integrat Biol, Guelph, ON N1G 2W1, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
DNA barcoding; market survey; case study; mislabeled seafood; market substitution; species identification;
D O I
10.1016/j.foodres.2008.07.005
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
Seafood authentication and food safety concerns are a growing issue in today's global marketplace, although traditional morphology-based identification keys and existing Molecular approaches have limitations for species identification. Recently, DNA barcoding has gained support as a rapid, cost-effective and broadly applicable molecular diagnostic technique for this purpose. However. the maturity of the barcode database as a tool for seafood authentication has yet to be tested using real market samples. The present case study was undertaken for this reason. Though the database is undergoing continual development, it was able to provide species matches of >97% sequence similarity for 90 of 91 samples tested. Twenty-five percent of the samples were potentially mislabeled, demonstrating that DNA barcodes are already a powerful tool for the identification of seafood to the species level. We conclude that barcodes have broad applicability for authenticity testing and the phylogeographic patterning of genetic diversity can also inform aspects of traceability. (C) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:828 / 837
页数:10
相关论文
共 47 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   IDENTIFICATION OF THUNNUS TUNA SPECIES BY THE POLYMERASE CHAIN-REACTION AND DIRECT SEQUENCE-ANALYSIS OF THEIR MITOCHONDRIAL CYTOCHROME-B GENES [J].
BARTLETT, SE ;
DAVIDSON, WS .
CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES, 1991, 48 (02) :309-317
[3]  
BARTLETT SE, 1992, BIOTECHNIQUES, V12, P408
[4]  
Benson DA, 2010, NUCLEIC ACIDS RES, V38, pD46, DOI [10.1093/nar/gkp1024, 10.1093/nar/gkq1079, 10.1093/nar/gkl986, 10.1093/nar/gks1195, 10.1093/nar/gkw1070, 10.1093/nar/gkr1202, 10.1093/nar/gkn723, 10.1093/nar/gkx1094]
[5]   On the unreliability of published DNA sequences [J].
Bridge, PD ;
Roberts, PJ ;
Spooner, BM ;
Panchal, G .
NEW PHYTOLOGIST, 2003, 160 (01) :43-48
[6]  
BROWNSTEIN C, 2003, CONSERVATION MAGAZIN, V4, P39, DOI DOI 10.1111/J.1526-4629.2003.TB00075.X
[7]  
Costa FO, 2007, GENOMICS SOC POLICY, V3, P29, DOI DOI 10.1186/1746-5354-3-2-29
[8]   DNA barcodes: recent successes and future prospects [J].
Dasmahapatra, K. K. ;
Mallet, J. .
HEREDITY, 2006, 97 (04) :254-255
[9]   Validation of the barcoding gene COI for use in forensic genetic species identification [J].
Dawnay, Nick ;
Ogden, Rob ;
McEwing, Ross ;
Carvalho, Gary R. ;
Thorpe, Roger S. .
FORENSIC SCIENCE INTERNATIONAL, 2007, 173 (01) :1-6
[10]   A comprehensive DNA sequence library is essential for identification with DNA barcodes [J].
Ekrem, Torbjorn ;
Willassen, Endre ;
Stur, Elisabeth .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2007, 43 (02) :530-542