RSVSim: an R/Bioconductor package for the simulation of structural variations

被引：59

作者：

Bartenhagen, Christoph ^{[1
]}

Dugas, Martin ^{[1
]}

机构：

[1] Univ Munster, Inst Med Informat, D-48149 Munster, Germany

来源：

BIOINFORMATICS | 2013年 / 29卷 / 13期

关键词：

END;

D O I：

10.1093/bioinformatics/btt198

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

RSVSim is a tool for the simulation of deletions, insertions, inversions, tandem duplications and translocations of various sizes in any genome available as FASTA-file or data package in R. The structural variations can be generated randomly, based on user-supplied genomic coordinates or associated to various kinds of repeats. The package further comprises functions to estimate the distribution of structural variation sizes from real datasets.

引用

页码：1679 / 1681

页数：3

共 18 条

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