Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)10]3

被引:268
作者
Berisio, R
Vitagliano, L
Mazzarella, L
Zagari, A
机构
[1] CNR, Ctr Studio Biocristallog, I-80134 Naples, Italy
[2] Univ Naples Federico II, Dipartimento Chim, I-80126 Naples, Italy
[3] Univ Naples Federico II, Dipartimento Chim Biol, I-80134 Naples, Italy
[4] Biotecnol Avanzate Scarl, CEINGE, Naples, Italy
关键词
collagen; protein structure stability; X-ray structure; triple helix; proline;
D O I
10.1110/ps.32602
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The first report of the full-length structure of the collagen-like polypeptide [(Pro-Pro-Gly)(10)](3) is given. This structure was obtained from crystals grown in a microgravity environment, which diffracted up to 1.3 Angstrom, using synchrotron radiation. The final model, which was refined to an R-factor of 0.18, is the highest-resolution description of a collagen triple helix reported to date. This structure provides clues regarding a series of aspects related to collagen triple helix structure and assembly. The strict dependence of proline puckering on the position inside the Pro-Pro-Gly triplets and the correlation between backbone and side chain dihedral angles support the propensity-based mechanism of triple helix stabilization/destabilization induced by hydroxyproline. Furthermore, the analysis of [(Pro-Pro-Gly)(10)](3) packing, which is governed by electrostatic interactions, suggests that charges may act as locking features in the axial organization of triple helices in the collagen fibrils.
引用
收藏
页码:262 / 270
页数:9
相关论文
共 47 条
[1]   HYDRATION STRUCTURE OF A COLLAGEN PEPTIDE [J].
BELLA, J ;
BRODSKY, B ;
BERMAN, HM .
STRUCTURE, 1995, 3 (09) :893-906
[2]   CRYSTAL-STRUCTURE AND MOLECULAR-STRUCTURE OF A COLLAGEN-LIKE PEPTIDE AT 1.9-ANGSTROM RESOLUTION [J].
BELLA, J ;
EATON, M ;
BRODSKY, B ;
BERMAN, HM .
SCIENCE, 1994, 266 (5182) :75-81
[3]   Effects of microgravity on the crystal quality of a collagen-like polypeptide [J].
Berisio, R ;
Vitagliano, L ;
Sorrentino, G ;
Carotenuto, L ;
Piccolo, C ;
Mazzarella, L ;
Zagari, A .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2000, 56 :55-61
[4]  
Berisio R, 2001, BIOPOLYMERS, V56, P8, DOI 10.1002/1097-0282(2000)56:1<8::AID-BIP1037>3.0.CO
[5]  
2-W
[6]   The Protein Data Bank and the challenge of structural genomics [J].
Berman, HM ;
Bhat, TN ;
Bourne, PE ;
Feng, ZK ;
Gilliland, G ;
Weissig, H ;
Westbrook, J .
NATURE STRUCTURAL BIOLOGY, 2000, 7 (Suppl 11) :957-959
[7]   Conformational stability of collagen relies on a stereoelectronic effect [J].
Bretscher, LE ;
Jenkins, CL ;
Taylor, KM ;
DeRider, ML ;
Raines, RT .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (04) :777-778
[8]   Further additions to MolScript version 1.4, including reading and contouring of electron-density maps [J].
Esnouf, RM .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1999, 55 :938-940
[9]   The ultrahigh resolution crystal structure of ribonuclease A containing an isoaspartyl residue: Hydration and sterochemical analysis [J].
Esposito, L ;
Vitagliano, L ;
Sica, F ;
Sorrentino, G ;
Zagari, A ;
Mazzarella, L .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 297 (03) :713-732
[10]  
Fields GB, 1996, BIOPOLYMERS, V40, P345, DOI 10.1002/(SICI)1097-0282(1996)40:4<345::AID-BIP1>3.0.CO