Prediction of cyclohexane-water distribution coefficients with COSMO-RS on the SAMPL5 data set

被引:51
作者
Klamt, Andreas [1 ,2 ]
Eckert, Frank [1 ]
Reinisch, Jens [1 ]
Wichmann, Karin [1 ]
机构
[1] COSMOl GmbH&CoKG, Imbacher Weg 46, D-51379 Leverkusen, Germany
[2] Univ Regensburg, Inst Phys & Theoret Chem, D-93040 Regensburg, Germany
关键词
Solvation; Distribution coefficients; COSMO-RS; SAMPL5; Molecular modeling; Molecular simulation; ENERGIES; MODEL;
D O I
10.1007/s10822-016-9927-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Conductor-Like-Screening-Model for Real Solvents (COSMO-RS) method has been used for the blind prediction of cyclohexane-water distribution coefficients logD within the SAMPL challenge. The partition coefficient logP of the neutral species was calculated first and then corrected for dissociation or protonation, as appropriate for acidic or basic solutes, to obtain the cyclohexane-water logD. Using the latest version of the COSMOtherm implementation, this approach in combination with a rigorous conformational sampling yielded a predictive accuracy of 2.11 log units (RMSD) for the 53 compounds of the blind prediction dataset. By that it was the most accurate of all contest submissions and it also achieved the best rank order. The RMSD mainly arises from a group of outliers in the negative logD range, which at least partly may arise from dimerization or other experimental problems coming up for very polar molecules in very non-polar solvents.
引用
收藏
页码:959 / 967
页数:9
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