PSTH-based classification of sensory stimuli using ensembles of single neurons

被引:101
作者
Foffani, G
Moxon, KA
机构
[1] Drexel Univ, Sch Biomed Engn Sci & Hlth Syst, Philadelphia, PA 19104 USA
[2] Politecn Milan, Dept Biomed Engn, I-20133 Milan, Italy
关键词
somatosensory; population coding; multi-electrode whiskers; discrinunant analysis; neural code;
D O I
10.1016/j.jneumeth.2003.12.011
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The problem of understanding how ensembles of neurons code for somatosensory information has been defined as a classification problem: given the response of a population of neurons to a set of stimuli, which stimulus generated the response on a single-trial basis? Multivariate statistical techniques such as linear discriminant analysis (LDA) and artificial neural networks (ANNs), and different types of preprocessing stages. such as principal and independent component analysis, have been used to solve this classification problem, with surprisingly small performance differences. Therefore. the goal of this project was to design a new method to maximize computational efficiency rather than classification performance. We developed a peri-stimulus time histogram (PSTH)-based method, which consists of creating a set of templates based on the average neural responses to stimuli and classifying each single trial by assigning it to the stimulus with the 'closest' template in the Euclidean distance sense. The PSTH-based method is computationally more efficient than methods as simple as linear discriminant analysis. performs significantly better than discriminant analyses (linear, quadratic or Mahalanobis) when small binsizes are used (1 ms) and as well as LDA with any other binsize. is optimal among other minimum-distance classifiers and can be optimally applied on raw neural data without a previous stage of dimension reduction. We conclude that the PSTH-based method is an efficient alternative to more sophisticated methods such as LDA and ANNs to study how ensemble of neurons code for discrete sensory stimuli, especially when datasets with many variables are used and when the time resolution of the neural code is one of the factors of interest. (C) 2004 Elsevier B.V. All rights reserved.
引用
收藏
页码:107 / 120
页数:14
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