The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl- iron ligation in the active site iron complex

被引:175
作者
Hiromoto, Takeshi [1 ]
Ataka, Kenichi [2 ]
Pilak, Oliver [1 ]
Vogt, Sonja [1 ]
Stagni, Marco Salomone [3 ]
Meyer-Klaucke, Wolfram [3 ]
Warkentin, Eberhard [4 ]
Thauer, Rudolf K. [1 ]
Shima, Seigo [1 ]
Ermler, Ulrich [4 ]
机构
[1] Max Planck Inst Terr Mikrobiol, D-35043 Marburg, Germany
[2] Univ Bielefeld, Dept Chem, D-33615 Bielefeld, Germany
[3] EMBL Hamburg, D-22603 Hamburg, Germany
[4] Max Planck Inst Biophys, D-60438 Frankfurt, Germany
关键词
Hydrogenase; Iron-guanylylpyridinol-cofactor; Methanogenic archaea; Iron complex; X-ray crystal structure; X-ray absorption spectroscopy; CLUSTER-FREE HYDROGENASE; METAL-FREE HYDROGENASE; METHANOGENIC ARCHAEA; LIGHT-INACTIVATION; CO DEHYDROGENASE; DIFFRACTION DATA; HMD; REFINEMENT; NICKEL;
D O I
10.1016/j.febslet.2009.01.017
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
[Fe]-hydrogenase is one of three types of enzymes known to activate H-2. Crystal structure analysis recently revealed that its active site iron is ligated square-pyramidally by Cys176-sulfur, two CO, an "unknown" ligand and the sp(2)-hybridized nitrogen of a unique iron-guanylylpyridinol-cofactor. We report here on the structure of the C176A mutated enzyme crystallized in the presence of dithiothreitol (DTT). It suggests an iron center octahedrally coordinated by one DTT-sulfur and one DTT-oxygen, two CO, the 2-pyridinol's nitrogen and the 2-pyridinol's 6-formylmethyl group in an acyliron ligation. This result led to a re-interpretation of the iron ligation in the wild-type. (c) 2009 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:585 / 590
页数:6
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