Multi-Field-of-View Framework for Distinguishing Tumor Grade in ER plus Breast Cancer From Entire Histopathology Slides

被引:97
作者
Basavanhally, Ajay [1 ]
Ganesan, Shridar [2 ]
Feldman, Michael [3 ]
Shih, Natalie [3 ]
Mies, Carolyn [3 ]
Tomaszewski, John [4 ]
Madabhushi, Anant [5 ]
机构
[1] Rutgers State Univ, Dept Biomed Engn, Piscataway, NJ 08854 USA
[2] Canc Inst New Jersey, New Brunswick, NJ 08903 USA
[3] Hosp Univ Penn, Dept Surg Pathol, Philadelphia, PA 19104 USA
[4] SUNY Buffalo, Dept Pathol & Anat Sci, Buffalo, NY 14260 USA
[5] Case Western Reserve Univ, Dept Biomed Engn, Cleveland, OH 44106 USA
基金
美国国家科学基金会;
关键词
Breast cancer (BCa); digital pathology; image analysis; modified Bloom-Richardson (mBR) grade; multi-field-of-view (multi-FOV); nuclear architecture; nuclear texture; FEATURE-SELECTION; BLOOM-RICHARDSON; CLASSIFICATION; CARCINOMA; REPRODUCIBILITY; PROLIFERATION; HETEROGENEITY; EVOLUTION; FEATURES; TEXTURE;
D O I
10.1109/TBME.2013.2245129
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Modified Bloom-Richardson (mBR) grading is known to have prognostic value in breast cancer (BCa), yet its use in clinical practice has been limited by intra-and interobserver variability. The development of a computerized system to distinguish mBR grade from entire estrogen receptor-positive (ER+) BCa histopathology slides will help clinicians identify grading discrepancies and improve overall confidence in the diagnostic result. In this paper, we isolate salient image features characterizing tumor morphology and texture to differentiate entire hematoxylin and eosin (H and E) stained histopathology slides based on mBR grade. The features are used in conjunction with a novel multi-field-of-view (multi-FOV) classifier-a whole-slide classifier that extracts features from a multitude of FOVs of varying sizes-to identify important image features at different FOV sizes. Image features utilized include those related to the spatial arrangement of cancer nuclei (i.e., nuclear architecture) and the textural patterns within nuclei (i.e., nuclear texture). Using slides from 126 ER+ patients (46 low, 60 intermediate, and 20 high mBR grade), our grading system was able to distinguish low versus high, low versus intermediate, and intermediate versus high grade patients with area under curve values of 0.93, 0.72, and 0.74, respectively. Our results suggest that the multi-FOV classifier is able to 1) successfully discriminate low, medium, and high mBR grade and 2) identify specific image features at different FOV sizes that are important for distinguishing mBR grade in H and E stained ER+ BCa histology slides.
引用
收藏
页码:2089 / 2099
页数:11
相关论文
共 57 条
[1]  
Basavanhally A., 2011, P SPIE MED IMAG, P1
[2]  
Basavanhally A., 2011, J PATHOL INF, V2
[3]  
Basavanhally A, 2011, I S BIOMED IMAGING, P125, DOI 10.1109/ISBI.2011.5872370
[4]   COMPUTER-AIDED PROGNOSIS OF ER plus BREAST CANCER HISTOPATHOLOGY AND CORRELATING SURVIVAL OUTCOME WITH ONCOTYPE DX ASSAY [J].
Basavanhally, Ajay ;
Xu, Jun ;
Madabhushi, Anant ;
Ganesan, Shridar .
2009 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1 AND 2, 2009, :851-+
[5]   Computerized Image-Based Detection and Grading of Lymphocytic Infiltration in HER2+Breast Cancer Histopathology [J].
Basavanhally, Ajay Nagesh ;
Ganesan, Shridar ;
Agner, Shannon ;
Monaco, James Peter ;
Feldman, Michael D. ;
Tomaszewski, John E. ;
Bhanot, Gyan ;
Madabhushi, Anant .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2010, 57 (03) :642-653
[6]   Systematic Analysis of Breast Cancer Morphology Uncovers Stromal Features Associated with Survival [J].
Beck, Andrew H. ;
Sangoi, Ankur R. ;
Leung, Samuel ;
Marinelli, Robert J. ;
Nielsen, Torsten O. ;
van de Vijver, Marc J. ;
West, Robert B. ;
van de Rijn, Matt ;
Koller, Daphne .
SCIENCE TRANSLATIONAL MEDICINE, 2011, 3 (108)
[7]  
Bellman RichardE., 1957, Ann. Oper. Res, DOI DOI 10.1007/BF02188548
[8]   A multiresolution diffused expectation-maximization algorithm for medical image segmentation [J].
Boccignone, Giuseppe ;
Napoletano, Paolo ;
Caggiano, Vittorio ;
Ferraro, Mario .
COMPUTERS IN BIOLOGY AND MEDICINE, 2007, 37 (01) :83-96
[9]  
Boiesen P, 2000, ACTA ONCOL, V39, P41
[10]   Random forests [J].
Breiman, L .
MACHINE LEARNING, 2001, 45 (01) :5-32