C-elegans and H-sapiens mRNAs with edited 3′ UTRs are present on polysomes

被引:79
作者
Hundley, Heather A. [1 ,2 ]
Krauchuk, Ammie A. [1 ,2 ]
Bass, Brenda L. [1 ,2 ]
机构
[1] Univ Utah, Dept Biochem, Salt Lake City, UT 84112 USA
[2] Univ Utah, Howard Hughes Med Inst, Salt Lake City, UT 84112 USA
基金
美国国家卫生研究院;
关键词
ADAR; RNA editing; double-stranded RNA; post-transcriptional regulation; translation;
D O I
10.1261/rna.1165008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Adenosine deaminases that act on RNA (ADARs) are editing enzymes that convert adenosine to inosine in double-stranded RNA ( dsRNA). ADARs sometimes target codons so that a single mRNA yields multiple protein isoforms. However, ADARs most often target noncoding regions of mRNAs, such as untranslated regions ( UTRs). To understand the function of extensive double-stranded 3' UTR structures, and the inosines within them, we monitored the fate of reporter and endogenous mRNAs that include structured 3' UTRs in wild-type Caenorhabditis elegans and in strains with mutations in the ADAR genes. In general, we saw little effect of editing on stability or translatability of mRNA, although in one case an ADR-1 dependent effect was observed. Importantly, whereas previous studies indicate that inosine-containing RNAs are retained in the nucleus, we show that both C. elegans and Homo sapiens mRNAs with edited, structured 3' UTRs are present on translating ribosomes.
引用
收藏
页码:2050 / 2060
页数:11
相关论文
共 38 条
[1]   Widespread A-to-I RNA editing of alu-containing mRNAs in the human transcriptome [J].
Athanasiadis, A ;
Rich, A ;
Maas, S .
PLOS BIOLOGY, 2004, 2 (12) :2144-2158
[2]   AN UNWINDING ACTIVITY THAT COVALENTLY MODIFIES ITS DOUBLE-STRANDED-RNA SUBSTRATE [J].
BASS, BL ;
WEINTRAUB, H .
CELL, 1988, 55 (06) :1089-1098
[3]   RNA editing by adenosine deaminases that act on RNA [J].
Bass, BL .
ANNUAL REVIEW OF BIOCHEMISTRY, 2002, 71 :817-846
[4]   A survey of RNA editing in human brain [J].
Blow, M ;
Futreal, PA ;
Wooster, R ;
Stratton, MR .
GENOME RESEARCH, 2004, 14 (12) :2379-2387
[5]  
BRENNER S, 1974, GENETICS, V77, P71
[6]   Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins [J].
Brownawell, AM ;
Macara, IG .
JOURNAL OF CELL BIOLOGY, 2002, 156 (01) :53-64
[7]   Regulation of serotonin-2C receptor G-protein coupling by RNA editing [J].
Burns, CM ;
Chu, H ;
Rueter, SM ;
Hutchinson, LK ;
Canton, H ;
SandersBush, E ;
Emeson, RB .
NATURE, 1997, 387 (6630) :303-308
[8]   The double-stranded RNA-binding motif, a versatile macromolecular docking platform [J].
Chang, KY ;
Ramos, A .
FEBS JOURNAL, 2005, 272 (09) :2109-2117
[9]   Translocation of C. elegans CED-4 to nuclear membranes during programmed cell death [J].
Chen, FL ;
Hersh, BM ;
Conradt, B ;
Zhou, Z ;
Riemer, D ;
Gruenbaum, Y ;
Horvitz, HR .
SCIENCE, 2000, 287 (5457) :1485-1489
[10]   Alu element-mediated gene silencing [J].
Chen, Ling-Ling ;
DeCerbo, Joshua N. ;
Carmichael, Gordon G. .
EMBO JOURNAL, 2008, 27 (12) :1694-1705