Challenges in molecular simulation of homogeneous ice nucleation

被引:73
作者
Brukhno, Andrey V. [1 ]
Anwar, Jamshed [1 ]
Davidchack, Ruslan [2 ]
Handel, Richard [2 ]
机构
[1] Univ Bradford, Inst Pharmaceut Innovat, Bradford BD7 1DP, W Yorkshire, England
[2] Univ Leicester, Dept Math, Leicester LE1 7RH, Leics, England
基金
英国工程与自然科学研究理事会;
关键词
D O I
10.1088/0953-8984/20/49/494243
中图分类号
O469 [凝聚态物理学];
学科分类号
070205 ;
摘要
We address the problem of recognition and growth of ice nuclei in simulation of supercooled bulk water. Bond orientation order parameters based on the spherical harmonics analysis are shown to be ineffective when applied to ice nucleation. Here we present an alternative method which robustly differentiates between hexagonal and cubic ice forms. The method is based on accumulation of the maximum projection of bond orientations onto a set of predetermined vectors, where different terms can contribute with opposite signs with the result that the irrelevant or incompatible molecular arrangements are damped out. We also introduce an effective cluster size by assigning a quality weight to each molecule in an ice-like cluster. We employ our cluster analysis in Monte Carlo simulation of homogeneous ice formation. Replica-exchange umbrella sampling is used for biasing the growth of the largest cluster and calculating the associated free energy barrier. Our results suggest that the ice formation can be seen as a two-stage process. Initially, short tetrahedrally arranged threads and rings are present; these become correlated and form a diffuse ice-genic network. Later, hydrogen bond arrangements within the amorphous ice-like structure gradually settle down and simultaneously 'tune-up' nearby water molecules. As a result, a well-shaped ice core emerges and spreads throughout the system. The process is very slow and diverse owing to the rough energetic landscape and sluggish molecular motion in supercooled water, while large configurational fluctuations are needed for crystallization to occur. In the small systems studied so far the highly cooperative molecular rearrangements eventually lead to a relatively fast percolation of the forming ice structure through the periodic boundaries, which inevitably affects the simulation results.
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页数:17
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共 59 条
  • [1] ASCER JP, 2001, J BIOPHYS, V81, P1389
  • [2] Prediction of absolute crystal-nucleation rate in hard-sphere colloids
    Auer, S
    Frenkel, D
    [J]. NATURE, 2001, 409 (6823) : 1020 - 1023
  • [3] High-resolution subsurface water-ice distributions on Mars
    Bandfield, Joshua L.
    [J]. NATURE, 2007, 447 (7140) : 64 - U1
  • [4] Monitoring ice nucleation in pure and salty water via high-speed imaging and computer simulations
    Bauerecker, Sigurd
    Ulbig, Peter
    Buch, Victoria
    Vrbka, Lubos
    Jungwirth, Pavel
    [J]. JOURNAL OF PHYSICAL CHEMISTRY C, 2008, 112 (20) : 7631 - 7636
  • [5] Tissue preparation: Tissue issues
    Blow, Nathan
    [J]. NATURE, 2007, 448 (7156) : 959 - 964
  • [6] BROUKHNO AV, 2003, THESIS LUND U SWEDEN
  • [7] BRUKHNO A, 2007, LONG TIM SCAL DYN WO
  • [8] A new molecular-dynamics based approach for molecular crystal structure search -: art. no. 051108
    Buch, V
    Martonák, R
    Parrinello, M
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2005, 123 (05)
  • [9] Stresses inside critical nuclei
    Cacciuto, A
    Frenkel, D
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2005, 109 (14) : 6587 - 6594
  • [10] No evidence for thick deposits of ice at the lunar south pole
    Campbell, Donald B.
    Campbell, Bruce A.
    Carter, Lynn M.
    Margot, Jean-Luc
    Stacy, Nicholas J. S.
    [J]. NATURE, 2006, 443 (7113) : 835 - 837