Temporal classification of Drosophila segmentation gene expression patterns by the multi-valued neural recognition method

被引:20
作者
Aizenberg, I
Myasnikova, E
Samsonova, M
Reinitz, J
机构
[1] Inst High Performance Comp & Data Bases, St Petersburg 198005, Russia
[2] Neural Networks Techno NNT Ltd, IL-52523 Ramat Gan, Israel
[3] SUNY Stony Brook, Dept Appl Math & Stat, Stony Brook, NY 11794 USA
基金
美国国家卫生研究院;
关键词
gene expression; Drosophila; functional genomics; classification; neural networks; multi-valued neurons;
D O I
10.1016/S0025-5564(01)00104-3
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
In order to reconstruct the establishment of the body pattern over time in Drosophila embryos, we have developed automated methods for detecting the age of an embryo on the basis of knowledge about its gene expression patterns. In this paper we perform temporal classification of confocal images of expression patterns of genes controlling segmentation by means of a neural network based on multi-valued neurons (MVN). MVN are artificial neural processing elements with complex-valued weights and high functionality, which proved to be efficient for solving the image recognition problems. The results obtained by this method confirm its efficiency for image recognition and indicate that the method can detect characteristic features of expression patterns which mark their development over time. (C) 2002 Elsevier Science Inc. All rights reserved.
引用
收藏
页码:145 / 159
页数:15
相关论文
共 31 条
[1]  
Ahmed N., 1975, ORTHOGONAL TRANSFORM
[2]  
Aizenberg IN, 1999, LECT NOTES COMPUT SC, V1625, P306
[3]   Application of the neural networks based on multi-valued neurons in image processing and recognition [J].
Aizenberg, IN ;
Aizenberg, NN .
APPLICATIONS OF ARTIFICIAL NEURAL NETWORKS IN IMAGE PROCESSING III, 1998, 3307 :88-97
[4]   Processing of noisy and small-detailed gray-scale images using cellular neural networks [J].
Aizenberg, IN .
JOURNAL OF ELECTRONIC IMAGING, 1997, 6 (03) :272-285
[5]  
AIZENBERG IN, 2000, MULTI VALUED UNIVERA
[6]  
Aizenberg N.N., 1992, P 2 INT WORKSH CELL, P36
[7]  
AKAM M, 1987, DEVELOPMENT, V101, P1
[8]  
FOE VE, 1983, J CELL SCI, V61, P31
[9]  
Haykin S., 1994, NEURAL NETWORKS COMP
[10]   REGULATION OF SEGMENT POLARITY GENES IN THE DROSOPHILA BLASTODERM BY FUSHI-TARAZU AND EVEN-SKIPPED [J].
INGHAM, PW ;
BAKER, NE ;
MARTINEZARIAS, A .
NATURE, 1988, 331 (6151) :73-75