Structure of ferric soybean leghemoglobin a nicotinate at 2.3 angstrom resolution

被引:22
作者
Ellis, PJ [1 ]
Appleby, CA [1 ]
Guss, JM [1 ]
Hunter, WN [1 ]
Ollis, DL [1 ]
Freeman, HC [1 ]
机构
[1] CSIRO,DIV PLANT IND,CANBERRA,ACT 2601,AUSTRALIA
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1997年 / 53卷
关键词
D O I
10.1107/S0907444997000292
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Soybean leghemoglobin a is a small (16 kDa) protein facilitating the transport of O-2 to respiring N-2-fixing bacteria at low free-O-2 tension. The crystal structure of soybean ferric leghemoglobin a nicotinate has been refined at 2.3 Angstrom resolution. The final R factor is 15.8% for 6877 reflections between 6.0 and 2.3 Angstrom. The structure of soybean leghemoglobin a (143 residues) is closely similar to that of lupin leghemoglobin II (153 residues), the proteins having 82 identical residues when the sequences are aligned. The new structure provides support for the conclusion that the unique properties of leghemoglobin arise principally from a heme pocket considerably larger and more flexible than that of myoglobin, a strongly ruffled heme group, and a proximal histidine orientation more favourable to ligand binding.
引用
收藏
页码:302 / 310
页数:9
相关论文
共 34 条
[1]  
ANDERSSON CR, 1997, IN PRESS P NATL ACAD
[2]  
APPLEBY CA, 1992, SCI PROG, V76, P365
[3]   LEGHEMOGLOBIN AND RHIZOBIUM RESPIRATION [J].
APPLEBY, CA .
ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 1984, 35 :443-478
[4]  
ARUTYUNYAN E G, 1981, Molekulyarnaya Biologiya (Moscow), V15, P27
[5]  
Arutyunyan E. G., 1980, Soviet Physics - Crystallography, V25, P302
[6]  
ARUTYUNYAN EG, 1980, SOV PHYS-CRYSTALLOGR, V25, P43
[7]   THE PROTON DEPENDENCE OF NICOTINATE BINDING TO SOYBEAN, KIDNEY BEAN AND LUPIN FERRIC LEGHEMOGLOBINS [J].
ATANASOV, BP ;
DIMITROVA, EA ;
KUDRYAVTSEVA, NN ;
ZHIZNEVSKAYA, GY ;
APPLEBY, CA .
BIOCHIMICA ET BIOPHYSICA ACTA, 1989, 998 (01) :80-84
[8]   DETERMINANTS OF A PROTEIN FOLD - UNIQUE FEATURES OF THE GLOBIN AMINO-ACID-SEQUENCES [J].
BASHFORD, D ;
CHOTHIA, C ;
LESK, AM .
JOURNAL OF MOLECULAR BIOLOGY, 1987, 196 (01) :199-216
[9]   PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].
BERNSTEIN, FC ;
KOETZLE, TF ;
WILLIAMS, GJB ;
MEYER, EF ;
BRICE, MD ;
RODGERS, JR ;
KENNARD, O ;
SHIMANOUCHI, T ;
TASUMI, M .
JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542
[10]   DYNAMICS OF LIGAND-BINDING TO HEME-PROTEINS [J].
CASE, DA ;
KARPLUS, M .
JOURNAL OF MOLECULAR BIOLOGY, 1979, 132 (03) :343-368