A stochastic model for the sigmoidal behaviour of cooperative biological systems

被引:12
作者
Abundo, M
Accardi, L
Agro, AF
Mei, G
Rosato, N
机构
[1] UNIV ROMA TOR VERGATA,CTR VITO VOLTERRA,I-00133 ROME,ITALY
[2] UNIV ROMA TOR VERGATA,DIPARTIMENTO MATEMAT,I-00133 ROME,ITALY
[3] UNIV ROMA TOR VERGATA,DIPARTIMENTO MED SPERIMENTALE & SCI BIOCHIM,I-00133 ROME,ITALY
关键词
stochastic model; Markov chain; cooperativity; sigmoidal transition; fractal dimension; computer simulation;
D O I
10.1016/0301-4622(95)00111-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A stochastic model for cooperative transitions in biological systems based on a Markov chain is proposed. This model requires only two parameters, the mean probability, p, and the coupling capacity, Delta p, which measure the probability of forming a new weak bond depending on the number of similar bonds already formed and it is also responsible for the transition. In this paper we show how the model works for a large number of identical molecules and how it can be useful for studying the noise around the centre of the transition where, increasing the degree of cooperativity, i.e. the number n in the well-known Hill equation, the width of the noise increases along with its fractal dimension. A simple relationship between the degree of cooperativity and the parameter Delta p is proposed, suggesting that the cooperativity of real biological transitions is related to the coupling capacity Delta p of the present model.
引用
收藏
页码:313 / 323
页数:11
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