Ab initio calculations for exploring hydration patterns of adenine
被引:13
作者:
Kim, HT
论文数: 0引用数: 0
h-index: 0
机构:
Kumoh Natl Inst Technol, Dept Appl Chem, Kumi 730701, South KoreaKumoh Natl Inst Technol, Dept Appl Chem, Kumi 730701, South Korea
Kim, HT
[1
]
机构:
[1] Kumoh Natl Inst Technol, Dept Appl Chem, Kumi 730701, South Korea
来源:
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM
|
2004年
/
673卷
/
1-3期
关键词:
density functional theory;
DNA bases;
adenine-water complex;
hydration;
D O I:
10.1016/j.theochem.2003.12.006
中图分类号:
O64 [物理化学(理论化学)、化学物理学];
学科分类号:
070304 ;
081704 ;
摘要:
Density functional theory (DFT) has been used to optimize the hydrated structures of adenine. The systematic investigation in the hydration process of adenine is performed. The optimized geometries and hydration energies in the adenine-(H2O)(1 - 4) have been obtained by ab initio calculations at B3LYP/6-311++G(d, p) level. Adenine-(H2O)(1 - 2) complexes are mostly optimized to the structure of planar geometry. The optimized structures of adenine-(H2O)(3 - 4) Complexes are mixed with planar and non-planar geometries. The hydration energies of adenine show that the hydration process of adenine is competed by two ways within a 8 kcal/mol energy difference. (C) 2004 Elsevier B.V. All rights reserved.