MatrixPlot:: visualizing sequence constraints

被引：27

作者：

Gorodkin, J

Stærfeldt, HH

Lund, O

Brunak, S

机构：

[1] Tech Univ Denmark, Dept Biotechnol, Ctr Biol Sequence Anal, DK-2800 Lyngby, Denmark

[2] Aarhus Univ, Inst Biol Sci, Dept Ecol & Genet, DK-8000 Aarhus C, Denmark

来源：

BIOINFORMATICS | 1999年 / 15卷 / 09期

关键词：

D O I：

10.1093/bioinformatics/15.9.769

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

MatrixPlot is a program for making high-quality matrix plots, such as mutual information plots of sequence alignments and distance matrices of sequences with known three-dimensional coordinates. The user can add information about the sequences (e.g. a sequence logo profile) along the edges of the plot, as well as zoom in on any region in the plot.

引用

页码：769 / 770

页数：2

共 4 条

[1] PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].