Gibbs sampling methods for stick-breaking priors

被引:945
作者
Ishwaran, H
James, LF
机构
[1] Cleveland Clin Fdn, Dept Biostat & Epidemiol Wb4, Cleveland, OH 44195 USA
[2] Johns Hopkins Univ, Dept Math Sci, Baltimore, MD 21218 USA
关键词
blocked Gibbs sampler; Dirichlet process; generalized Dirichlet distribution; Pitman-Yor process; Polya urn Gibbs sampler; prediction rule; random probability measure; random weights; stable law;
D O I
10.1198/016214501750332758
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
A rich and flexible class of random probability measures, which we call stick-breaking pliers, can be constructed using a sequence of independent beta random variables. Examples of random measures that have this characterization include the Dirichlet process, its two-parameter extension, the two-parameter Poisson-Dirichlet process, finite dimensional Dirichlet priors, and beta two-parameter processes. The rich nature of stick-breaking priors offers Bayesians a useful class of priors for nonparametric problems, while the similar construction used in each prior can be exploited to develop a general computational procedure for fitting them. In this article we present two general types of Gibbs samplers that can be used to lit posteriors of Bayesian hierarchical models based on stick-breaking priors. The first type of Gibbs sampler, referred to as a Polya urn Gibbs sampler, is a generalized version of a widely used Gibbs sampling method currently employed for Dirichlet process computing. This method applies to stick-breaking priors with a known Polya urn characterization, that is, priors with an explicit and simple prediction rule. Our second method, the blocked Gibbs sampler, is based on an entirely different approach that works by directly sampling values from the posterior of the random measure. The blocked Gibbs sampler can be viewed as a more general approach because it works without requiring an explicit prediction rule. We find that the blocked Gibbs avoids some of the limitations seen with the Polya urn approach and should be simpler for nonexperts to use.
引用
收藏
页码:161 / 173
页数:13
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