The WWW as a Tool to Obtain Molecular Parameters

被引:22
作者
Tetko, Igor V. [1 ,2 ]
机构
[1] GSF, Inst Bioinformat, D-85764 Neuherberg, Germany
[2] IBPC, Biomed Dept, UA-253660 Kiev, Ukraine
关键词
on-line tools; Internet; physico-chemical parameters; toxicity; medicinal chemistry; drug design;
D O I
10.2174/1389557033487638
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
This article analyses molecular property calculation resources available on the Internet. The first section summarizes the on-line database resources that could be useful to search molecular and biological properties of chemicals, and indicates some principal databases with physicochemical, thermochemical, toxicity, cancer and HIV data. The second section overviews popular standalone programs for calculation of molecular descriptors. Some of these programs can be downloaded for free and used as standalone applications for calculation of molecular descriptors. The third section describes on-line tools for the prediction of molecular properties, activities and calculation of molecular descriptors. Analysis of emerging tools that can be useful to developing new on-line servers for the prediction of molecular parameters and properties is also given.
引用
收藏
页码:809 / 820
页数:12
相关论文
共 56 条
[1]  
[Anonymous], UCI REPOSITORY MACHI
[2]  
Bloch J., 2001, EFFECTIVE JAVA PROGR
[3]  
Brecher JS, 1998, CHIMIA, V52, P658
[4]   WWW small molecule modeling [J].
Carpy, AJM .
SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2002, 13 (3-4) :403-408
[5]   Structure/response correlations and similarity/diversity analysis by GETAWAY descriptors. 1. Theory of the novel 3D molecular descriptors [J].
Consonni, V ;
Todeschini, R ;
Pavan, M .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2002, 42 (03) :682-692
[6]   VolSurf: a new tool for the pharmacokinetic optimization of lead compounds [J].
Cruciani, G ;
Pastor, M ;
Guba, W .
EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES, 2000, 11 :S29-S39
[7]   JChem: Java']Java applets and modules supporting chemical database handling from web browsers [J].
Csizmadia, F .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2000, 40 (02) :323-324
[8]   High-throughput, in silico prediction of aqueous solubility based on one- and two-dimensional descriptors [J].
Engkvist, O ;
Wrede, P .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2002, 42 (05) :1247-1249
[9]   Fast calculation of molecular polar surface area as a sum of fragment-based contributions and its application to the prediction of drug transport properties [J].
Ertl, P ;
Rohde, B ;
Selzer, P .
JOURNAL OF MEDICINAL CHEMISTRY, 2000, 43 (20) :3714-3717
[10]  
Ertl P, 1998, CHIMIA, V52, P673