OBO-Edit - an ontology editor for biologists

被引：181

作者：

Day-Richter, John ^{[1
]}

Harris, Midori A.

Haendel, Melissa

机构：

[1] Lawrence Berkeley Natl Lab, Berkeley Bioinformat & Ontol Project, Berkeley, CA 94720 USA

[2] EMBL Outstn European Bioinformat Inst, GO Editorial Off, Cambridge CB10 1SD, England

[3] Univ Oregon, Zebrafish Informat Network, Eugene, OR 97403 USA

来源：

BIOINFORMATICS | 2007年 / 23卷 / 16期

关键词：

D O I：

10.1093/bioinformatics/btm112

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

OBO-Edit is an open source, platform-independent ontology editor developed and maintained by the Gene Ontology Consortium. Implemented in Java, OBO-Edit uses a graph-oriented approach to display and edit ontologies. OBO-Edit is particularly valuable for viewing and editing biomedical ontologies. Availability: https://sourceforge.net/project/showfiles.php?group_id = 36855 Contact: gohelp@geneontology.org.

引用

页码：2198 / 2200

页数：3

共 8 条

[1] An ontology for cell types
Bard, J
Rhee, SY
Ashburner, M
[J]. GENOME BIOLOGY, 2005, 6 (02)
[2] Anatomics: the intersection of anatomy and bioinformatics
Bard, JBL
[J]. JOURNAL OF ANATOMY, 2005, 206 (01) : 1 - 16
[3] Ontologies in biology: Design, applications and future challenges
Bard, JBL
Rhee, SY
[J]. NATURE REVIEWS GENETICS, 2004, 5 (03) : 213 - 222
[4] Bio-ontologies - fast and furious
Blake, J
[J]. NATURE BIOTECHNOLOGY, 2004, 22 (06) : 773 - 774
[5] GANSNER ER, 1999, SOFTWARE PRACTICE EX, P1
[6] A TRANSLATION APPROACH TO PORTABLE ONTOLOGY SPECIFICATIONS
GRUBER, TR
[J]. KNOWLEDGE ACQUISITION, 1993, 5 (02): : 199 - 220
[7] Toward principles for the representation of hierarchical knowledge in formal ontologies
Jones, DM
Paton, RC
[J]. DATA & KNOWLEDGE ENGINEERING, 1999, 31 (02) : 99 - 113
[8] Relations in biomedical ontologies -: art. no. R46
Smith, B
Ceusters, W
Klagges, B
Köhler, J
Kumar, A
Lomax, J
Mungall, C
Neuhaus, F
Rector, AL
Rosse, C
[J]. GENOME BIOLOGY, 2005, 6 (05)

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