Conservation of the MHC-like region throughout evolution

被引:21
作者
Danchin, EGJ
Abi-Rached, L
Gilles, A
Pontarotti, P
机构
[1] Univ Aix Marseille 1, EA Biodivers 2202, Phylogenom Lab, F-13331 Marseille 3, France
[2] Stanford Univ, Dept Biol Struct, Stanford, CA 94305 USA
关键词
comparative genomics; MHC; evolution; phylogenomics; conserved syntenies;
D O I
10.1007/s00251-003-0562-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Identification of conserved regions between the genomes of distant species is a crucial step in the reconstruction of the genomic organization of their last common ancestor. Here we confirm for the first time with robust evidence, the existence of a region of conserved synteny between the human genome and the Drosophila genome. This evolutionarily conserved synteny involves the human MHC and paralogous regions, and we identified 19 conserved genes between these two species in a Drosophila genomic region of less than 2 Mb. The statistical analysis of the distribution of these 19 genes between the Drosophila and human genomes shows that it cannot be explained by chance. Our study constitutes a first step towards the reconstruction of the genome of Urbilateria (the ancestor of all bilaterian) and allows for a better understanding of the evolutionary history of our genome as well as other metazoan genomes.
引用
收藏
页码:141 / 148
页数:8
相关论文
共 20 条
[1]   Evidence of en bloc duplication in vertebrate genomes [J].
Abi-Rached, L ;
Gilles, A ;
Shiina, T ;
Pontarotti, P ;
Inoko, H .
NATURE GENETICS, 2002, 31 (01) :100-105
[2]   The new animal phylogeny: Reliability and implications [J].
Adoutte, A ;
Balavoine, G ;
Lartillot, N ;
Lespinet, O ;
Prud'homme, B ;
de Rosa, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (09) :4453-4456
[3]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[4]   Fourfold faster rate of genome rearrangement in nematodes than in Drosophila [J].
Coghlan, A ;
Wolfe, KH .
GENOME RESEARCH, 2002, 12 (06) :857-867
[5]   A common plan for dorsoventral patterning in Bilateria [J].
DeRobertis, EM ;
Sasai, Y .
NATURE, 1996, 380 (6569) :37-40
[6]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[7]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[8]  
Galtier N, 1996, COMPUT APPL BIOSCI, V12, P543
[9]   THE MURINE AND DROSOPHILA HOMEOBOX GENE COMPLEXES HAVE COMMON FEATURES OF ORGANIZATION AND EXPRESSION [J].
GRAHAM, A ;
PAPALOPULU, N ;
KRUMLAUF, R .
CELL, 1989, 57 (03) :367-378
[10]   Extent of gene duplication in the genomes of Drosophila, nematode, and yeast [J].
Gu, ZL ;
Cavalcanti, A ;
Chen, FC ;
Bouman, P ;
Li, WH .
MOLECULAR BIOLOGY AND EVOLUTION, 2002, 19 (03) :256-262