Analysis of the human and mouse genomes identified an abundance of conserved non-genic sequences (CNGs). The significance and evolutionary depth of their conservation remain unanswered. We have quantified levels and patterns of conservation of 191 CNGs of human chromosome 21 in 14 mammalian species. We found that CNGs are significantly more conserved than protein-coding genes and noncoding RNAS (ncRNAs) within the mammalian class from primates to monotremes to marsupials. The pattern of substitutions in CNGs differed from that seen in protein-coding and ncRNA genes and resembled that of protein-binding regions. About 0.3% to 1% of the human genome corresponds to a previously unknown class of extremely constrained CNGs shared among mammals.
机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Chiaromonte, F
Yang, S
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机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Yang, S
Elnitski, L
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机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Elnitski, L
Yap, VB
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机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Yap, VB
Miller, W
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机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Miller, W
Hardison, RC
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Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USAPenn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
机构:
Penn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USAPenn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USA
Dermitzakis, ET
Clark, AG
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机构:
Penn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USAPenn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USA
机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Chiaromonte, F
Yang, S
论文数: 0引用数: 0
h-index: 0
机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Yang, S
Elnitski, L
论文数: 0引用数: 0
h-index: 0
机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Elnitski, L
Yap, VB
论文数: 0引用数: 0
h-index: 0
机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Yap, VB
Miller, W
论文数: 0引用数: 0
h-index: 0
机构:Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
Miller, W
Hardison, RC
论文数: 0引用数: 0
h-index: 0
机构:
Penn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USAPenn State Univ, Dept Biochem & Mol Biol, Althouse Lab 206, University Pk, PA 16802 USA
机构:
Penn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USAPenn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USA
Dermitzakis, ET
Clark, AG
论文数: 0引用数: 0
h-index: 0
机构:
Penn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USAPenn State Univ, Dept Biol, Inst Mol Evolutionary Genet, University Pk, PA 16802 USA