EPR techniques for studying radical enzymes

被引:33
作者
Jeschke, G [1 ]
机构
[1] Max Planck Inst Polymer Res, D-55021 Mainz, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS | 2005年 / 1707卷 / 01期
关键词
EPR; ENDOR; tyrosyl radical; glycyl radical; ribonucleotide reductase; Cob(II)alamine;
D O I
10.1016/j.bbabio.2004.02.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
EPR studies on radical enzymes are reviewed under the aspects of the information that they can provide and of the techniques that are used. An overview of organic radicals derived from amino acids, modified amino acids, and cofactors is given and g tensor data are compiled. The information accessible from a spectroscopic point of view is contrasted with the information required to understand enzyme structure and function, and some precautions are discussed that must be taken to derive the latter kind of information from the former. Structural dynamics is identified as an aspect that has rarely been addressed in the past although it is highly relevant for enzyme function. It is proposed that techniques introduced recently on other classes of proteins could help to close this gap. (c) 2004 Elsevier B.V. All rights reserved.
引用
收藏
页码:91 / 102
页数:12
相关论文
共 94 条
[1]   Dynamics of flavin in flavocytochrome b2:: A fluorescence study [J].
Albani, JR ;
Sillen, A ;
Engelborghs, Y ;
Gervais, M .
PHOTOCHEMISTRY AND PHOTOBIOLOGY, 1999, 69 (01) :22-26
[2]   Examples of high-frequency EPR studies in bioinorganic chemistry [J].
Andersson, KK ;
Schmidt, PP ;
Katterle, B ;
Strand, KR ;
Palmer, AE ;
Lee, SK ;
Solomon, EI ;
Gräslund, A ;
Barra, AL .
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 2003, 8 (03) :235-247
[3]   The use of high field/frequency EPR in studies of radical and metal sites in proteins and small inorganic models [J].
Andersson, KK ;
Barra, AL .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2002, 58 (06) :1101-1112
[4]   Two- and four-pulse ESEEM studies of the heme binding center of a low-spin ferriheme protein: the importance of a multi-frequency approach [J].
Astashkin, AV ;
Raitsimring, AM ;
Walker, FA .
CHEMICAL PHYSICS LETTERS, 1999, 306 (1-2) :9-17
[5]   Intraprotein radical transfer during photoactivation of DNA photolyase [J].
Aubert, C ;
Vos, MH ;
Mathis, P ;
Eker, APM ;
Brettel, K .
NATURE, 2000, 405 (6786) :586-590
[6]   Recent applications of density functional theory calculations to biomolecules [J].
Ban, FQ ;
Rankin, KN ;
Gauld, JW ;
Boyd, RJ .
THEORETICAL CHEMISTRY ACCOUNTS, 2002, 108 (01) :1-11
[7]   X- and W-band EPR and Q-band ENDOR studies of the flavin radical in the Na+-translocating NADH:quinone oxidoreductase from Vibrio cholerae [J].
Barquera, B ;
Morgan, JE ;
Lukoyanov, D ;
Scholes, CP ;
Gennis, RB ;
Nilges, MJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (01) :265-275
[8]   X-ray structure of pyruvate formate-lyase in complex with pyruvate and CoA - How the enzyme uses the Cys-418 thiyl radical for pyruvate cleavage [J].
Becker, A ;
Kabsch, W .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (42) :40036-40042
[9]   Pulsed electron-nuclear double resonance (ENDOR) at 140 GHz [J].
Bennati, M ;
Farrar, CT ;
Bryant, JA ;
Inati, SJ ;
Weis, V ;
Gerfen, GJ ;
Riggs-Gelasco, P ;
Stubbe, J ;
Griffin, RG .
JOURNAL OF MAGNETIC RESONANCE, 1999, 138 (02) :232-243
[10]  
Berliner L. J., 1976, SPIN LABELING THEORY, DOI [DOI 10.1016/B978-0-12-092350-2.50008-4, 10.1016/B978-0-12-092350-2.50008-4]