Genomic organisation, alternative splicing and polymorphisms of the human cardiac troponin T gene

被引:39
作者
Farza, H
Townsend, PJ
Carrier, L
Barton, PJ
Mesnard, L
Bährend, E
Forissier, JF
Fiszman, M
Yacoub, MH
Schwartz, K
机构
[1] Grp Hosp Pitie Salpetriere, INSERM, Unite Rech 153, F-75634 Paris, France
[2] Hop Marie Lannelongue, CNRS, URA 1159, F-92350 Le Plessis Robinson, France
[3] Univ London Imperial Coll Sci Technol & Med, Sch Med, NHLI, London, England
关键词
human cardiac troponin T; gene structure; polymorphisms; sequence; alternative splicing;
D O I
10.1006/jmcc.1998.0698
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Troponin T (TnT) is a component of the troponin complex which regulates muscle contraction in response to alterations in intracellular calcium ion concentration. In human heart, multiple isoforms of cardiac TnT have been described on the basis of antibody studies and molecular cloning of corresponding cDNAs, These isoforms are all derived from the transcription of a single gene, TNNT2, located on chromosome 1q32, and generated by alternative splicing, We show here that isoform diversity is achieved by the use of both alternative exons and alternative acceptor sites and present the organisation of the human TN.RITZ gene, which is composed of 17 exons spread over 17 kb. A potential structure of the promoter region is also presented, Several polymorphisms in both the exonic and intronic regions were identified, some of which may act as modulators of the expression of this gene, (C) 1998 Academic Press.
引用
收藏
页码:1247 / 1253
页数:7
相关论文
共 18 条
[1]   MOLECULAR-BASIS OF HUMAN CARDIAC TROPONIN-T ISOFORMS EXPRESSED IN THE DEVELOPING, ADULT, AND FAILING HEART [J].
ANDERSON, PAW ;
GREIG, A ;
MARK, TM ;
MALOUF, NN ;
OAKELEY, AE ;
UNGERLEIDER, RM ;
ALLEN, PD ;
KAY, BK .
CIRCULATION RESEARCH, 1995, 76 (04) :681-686
[2]  
COOPER TA, 1985, J BIOL CHEM, V260, P1140
[3]   Regulation of cardiac gene expression by GATA-4/5/6 [J].
Evans, T .
TRENDS IN CARDIOVASCULAR MEDICINE, 1997, 7 (03) :75-83
[4]   Codon 102 of the cardiac troponin T gene is a putative hot spot for mutations in familial hypertrophic cardiomyopathy [J].
Forissier, JF ;
Carrier, L ;
Farza, H ;
Bonne, G ;
Bercovici, J ;
Richard, P ;
Hainque, B ;
Townsend, PJ ;
Yacoub, MH ;
Faure, S ;
Dubourg, O ;
Millaire, A ;
Hagege, AA ;
Desnos, M ;
Komajda, M ;
Schwartz, K .
CIRCULATION, 1996, 94 (12) :3069-3073
[5]  
IANNELLO RC, 1991, J BIOL CHEM, V266, P3309
[6]  
JIN JP, 1988, J BIOL CHEM, V263, P7309
[7]   COMPLETE NUCLEOTIDE-SEQUENCE AND STRUCTURAL ORGANIZATION OF RAT CARDIAC TROPONIN-T GENE - A SINGLE GENE GENERATES EMBRYONIC AND ADULT ISOFORMS VIA DEVELOPMENTALLY REGULATED ALTERNATIVE SPLICING [J].
JIN, JP ;
HUANG, QQ ;
YEH, HI ;
LIN, JJC .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 227 (04) :1269-1276
[8]   Expression of cDNAs encoding mouse cardiac troponin T isoforms: Characterization of a large sample of independent clones [J].
Jin, JP ;
Wang, J ;
Zhang, JY .
GENE, 1996, 168 (02) :217-221
[9]   MYOGENIC AND MORPHOGENETIC DEFECTS IN THE HEART TUBES OF MURINE EMBRYOS LACKING THE HOMEO BOX GENE NKX2-5 [J].
LYONS, I ;
PARSONS, LM ;
HARTLEY, L ;
LI, RL ;
ANDREWS, JE ;
ROBB, L ;
HARVEY, RP .
GENES & DEVELOPMENT, 1995, 9 (13) :1654-1666
[10]   HUMAN CARDIAC TROPONIN-T - CLONING AND EXPRESSION OF NEW ISOFORMS IN THE NORMAL AND FAILING HEART [J].
MESNARD, L ;
LOGEART, D ;
TAVIAUX, S ;
DIRIONG, S ;
MERCADIER, JJ ;
SAMSON, F .
CIRCULATION RESEARCH, 1995, 76 (04) :687-692