Shewanella canadensis sp nov and Shewanella atlantica sp nov., manganese dioxide- and hexahydro-1,3,5-trinitro-1,3,5-triazine-reducing, psychrophilic marine bacteria

被引:25
作者
Zhao, Jian-Shen
Manno, Dominic
Thiboutot, Sonia
Ampleman, Guy
Hawari, Jalal
机构
[1] Natl Res Council Canada, Biotechnol Res Inst, Montreal, PQ H4P 2R2, Canada
[2] Def Res & Dev Canada, Valcartier, PQ G3J 1X5, Canada
关键词
D O I
10.1099/ijs.0.64596-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two strains belonging to the genus Shewanella, HAW-EB2(T) and HAW-EB5(T), were isolated previously from marine sediment sampled from the Atlantic Ocean, near Halifax harbour in Canada, for their potential to degrade explosive hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX). In the present study, strains HAW-EB2(T) and HAW-EB5(T) were found to display high 16S rRNA gene sequence similarity (90-99.5 %) to species of Shewanella, but their gyrB sequences were significantly different from each other and from species of Shewanella (79-87.6%). Furthermore, DNA-DNA hybridization showed that the genomic DNA of the two strains was only 22% related and showed less than 41% relatedness to closely related species of Shewanella. In comparison to other species of Shewanella, strains HAW-EB2(T) and HAW-EB5(T) were also unique in some phenotypic properties such as activities of beta-galactosidase and tyrosine arylamidase and the ability to metabolize certain organic acids and sugars. Both strains HAW-EB2(T) and HAW-EB5(T) utilize malate, valerate, peptone and yeast extract as sole carbon and energy sources. The major membrane fatty acids of the two strains were C-14:0, iso-C-15:0, C-16: 0, C-16:1 omega 7, C-18:1 omega 7 and C-20:5 omega 3 and their major quinones were Q-7, Q-8 and MK-7. On the basis of these results, strain HAW-EB2(T) (=NCIMB 14238(T) =CCUG 54553(T)) is proposed as the type strain of Shewanella canadensis sp. nov. and strain HAW-EB5(T) (=NCIMB 14239(T) =CCUG 54554(T)) is proposed as the type strain of Shewanella atlantica sp. nov.
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页码:2155 / 2162
页数:8
相关论文
共 35 条
[1]   ISOPRENOID QUINONE COMPOSITION OF SOME MARINE ALTEROMONAS, MARINOMONAS, DELEYA, PSEUDOMONAS AND SHEWANELLA SPECIES [J].
AKAGAWAMATSUSHITA, M ;
ITOH, T ;
KATAYAMA, Y ;
KURAISHI, H ;
YAMASATO, K .
JOURNAL OF GENERAL MICROBIOLOGY, 1992, 138 :2275-2281
[2]  
[Anonymous], 1983, COLD SPRING HARBOR L
[3]   Psychroflexus torquis gen. nov., sp. nov., a psychrophilic species from Antarctic sea ice, and reclassification of Flavobacterium gondwanense (Dobson et al. 1993) as Psychroflexus gondwanense gen. nov., comb. nov. [J].
Bowman, JP ;
McCammon, SA ;
Lewis, T ;
Skerratt, JH ;
Brown, JL ;
Nichols, DS ;
McMeekin, TA .
MICROBIOLOGY-UK, 1998, 144 :1601-1609
[4]   Methods for psychrophilic bacteria [J].
Bowman, JP .
METHODS IN MICROBIOLOGY, VOL 30, 2001, 30 :591-614
[5]   Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction [J].
Bowman, JP ;
McCammon, SA ;
Nichols, DS ;
Skerratt, JH ;
Rea, SM ;
Nichols, PD ;
McMeekin, TA .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1997, 47 (04) :1040-1047
[6]  
Bowman JP., 2005, BERGEYS MANUAL SYSTE, V2, P480
[7]  
Collins MD, 1994, Chemical Methods in Prokaryotic Systematics, P265
[8]  
Collins MD., 1985, METHOD MICROBIOL, P329, DOI DOI 10.1016/S0580-9517(08)70480-X
[9]  
DEMING JW, 1984, J GEN MICROBIOL, V130, P1911
[10]   LOCATION OF DOUBLE-BONDS IN POLYUNSATURATED FATTY-ACIDS BY GAS-CHROMATOGRAPHY MASS-SPECTROMETRY AFTER 4,4-DIMETHYLOXAZOLINE DERIVATIZATION [J].
FAY, L ;
RICHLI, U .
JOURNAL OF CHROMATOGRAPHY, 1991, 541 (1-2) :89-98