Tagged small molecule library approach for facilitated chemical genetics

被引:24
作者
Ahn, Young-Hoon [1 ]
Chang, Young-Tae [1 ]
机构
[1] NYU, Dept Chem, New York, NY 10003 USA
关键词
D O I
10.1021/ar700030k
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Chemical genetics is a powerful method which utilizes small molecule regulators to reveal the molecular basis of diverse biological processes. However, the current chemical genetic approach sometimes meets a serious bottleneck during the process of target identification. One faces difficulty in conjugating the active compound to an affinity matrix without losing or reducing its activity that leads to laborious structure-activity relationship (SAR) studies. To facilitate this process, we have developed a tagged triazine library containing a built-in linker that provides a straightforward transition from phenotypic screening to target identification. A strategy for constructinig a tagged library and applications with a streamlined target identification and subsequent mechanistic study are discussed in this Account.
引用
收藏
页码:1025 / 1033
页数:9
相关论文
共 54 条
[1]   From sequence to phenotype:: Reverse genetics in Drosophila melanogaster [J].
Adams, MD ;
Sekelsky, JJ .
NATURE REVIEWS GENETICS, 2002, 3 (03) :189-198
[2]   Isolation of protein ligands from large peptoid libraries [J].
Alluri, PG ;
Reddy, MM ;
Bachhawat-Sikder, K ;
Olivos, HJ ;
Kodadek, T .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (46) :13995-14004
[3]   Target identification in chemical genetics: The (often) missing link [J].
Burdine, L ;
Kodadek, T .
CHEMISTRY & BIOLOGY, 2004, 11 (05) :593-597
[4]   A small molecule suppressor of FK506 that targets the mitochondria and modulates ionic balance in Saccharomyces cerevisiae [J].
Butcher, RA ;
Schreiber, SL .
CHEMISTRY & BIOLOGY, 2003, 10 (06) :521-531
[5]   Model systems in drug discovery: chemical genetics meets genomics [J].
Carroll, PM ;
Dougherty, B ;
Ross-Macdonald, P ;
Browman, K ;
FitzGerald, K .
PHARMACOLOGY & THERAPEUTICS, 2003, 99 (02) :183-220
[6]   Pink-eyed dilution protein controls the processing of tyrosinase [J].
Chen, K ;
Manga, P ;
Orlow, SJ .
MOLECULAR BIOLOGY OF THE CELL, 2002, 13 (06) :1953-1964
[7]   Chemical genetics: exploring and controlling cellular processes with chemical probes [J].
Crews, CM ;
Splittgerber, U .
TRENDS IN BIOCHEMICAL SCIENCES, 1999, 24 (08) :317-320
[8]   Recent advances in chemical genomics [J].
Darvas, F ;
Dormán, G ;
Krajcsi, P ;
Puskás, LG ;
Kovári, Z ;
Lörincz, Z ;
Ürge, L .
CURRENT MEDICINAL CHEMISTRY, 2004, 11 (23) :3119-3145
[9]   A role for chemistry in stem cell biology [J].
Ding, S ;
Schultz, PG .
NATURE BIOTECHNOLOGY, 2004, 22 (07) :833-840
[10]   Using photolabile ligands in drug discovery and development [J].
Dormán, G ;
Prestwich, GD .
TRENDS IN BIOTECHNOLOGY, 2000, 18 (02) :64-77