Sequence-specific detection of PCR-amplified DNA by restriction enzyme release of hybrids

被引:2
作者
Estrada, G [1 ]
Colin, L [1 ]
Gaytan, P [1 ]
Alagon, A [1 ]
Lizardi, PM [1 ]
机构
[1] UNIV NACL AUTONOMA MEXICO,INST BIOTECNOL,DEPT MOL RECOGNIT & STRUCT BIOL,CUERNAVACA 62271,MORELOS,MEXICO
关键词
PCR; microtitre; nucleic acid detection; fluorescence; Entamoeba histolytica; repetitive sequences;
D O I
10.1006/mcpr.1996.0025
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We have developed a method to detect PCR amplicons that contain a restriction enzyme site. The method is called Polymerase Chain Reaction-Hybridization and Enzymatic Release Assay (PCR-HERA). The PCR product is hybridized to a synthetic oligonucleotide that is immobilized on a microtitre plate. Specific cleavage of the resulting hybrid by a restriction endonuclease liberates a fluorescein labeled arm of the immobilized DNA. We demonstrate the use of PCR-HERA to detect species-specific sequences of extra-chromosomal, ribosomal DNA, of Entamoeba histolytica. This highly specific assay does not require any washing steps and can be easily automated. (C) 1996 Academic Press Limited
引用
收藏
页码:179 / 185
页数:7
相关论文
共 12 条
[1]   SENSITIVE AND QUANTITATIVE DETECTION OF PCR-AMPLIFIED HIV-1 DNA PRODUCTS BY AN ENZYME-LINKED IMMUNOASSAY FOLLOWING SOLUTION HYBRIDIZATION WITH 2 DIFFERENTLY LABELED OLIGONUCLEOTIDE PROBES [J].
BONI, J ;
SCHUPBACH, J .
MOLECULAR AND CELLULAR PROBES, 1993, 7 (05) :361-371
[2]   NEW MEDIUM FOR AXENIC CULTIVATION OF ENTAMOEBA-HISTOLYTICA AND OTHER ENTAMOEBA [J].
DIAMOND, LS ;
HARLOW, DR ;
CUNNICK, CC .
TRANSACTIONS OF THE ROYAL SOCIETY OF TROPICAL MEDICINE AND HYGIENE, 1978, 72 (04) :431-432
[3]   PURIFICATION OF THERMUS-AQUATICUS DNA-POLYMERASE EXPRESSED IN ESCHERICHIA-COLI [J].
ENGELKE, DR ;
KRIKOS, A ;
BRUCK, ME ;
GINSBURG, D .
ANALYTICAL BIOCHEMISTRY, 1990, 191 (02) :396-400
[4]   DNA PROBES SPECIFIC FOR ENTAMOEBA-HISTOLYTICA POSSESSING PATHOGENIC AND NONPATHOGENIC ZYMODEMES [J].
GARFINKEL, LI ;
GILADI, M ;
HUBER, M ;
GITLER, C ;
MIRELMAN, D ;
REVEL, M ;
ROZENBLATT, S .
INFECTION AND IMMUNITY, 1989, 57 (03) :926-931
[5]   AN EXONUCLEASE-AMPLIFICATION COUPLED CAPTURE TECHNIQUE IMPROVES DETECTION OF PCR PRODUCT [J].
HOLLOWAY, B ;
ERDMAN, DD ;
DURIGON, EL ;
MURTAGH, JJ .
NUCLEIC ACIDS RESEARCH, 1993, 21 (16) :3905-3906
[6]  
LAZAR JG, 1986, REV INFECTIOUS DIS, V8, P228
[7]   NUCLEIC-ACID DETECTION USING NONRADIOACTIVE LABELING METHODS [J].
MANSFIELD, ES ;
WORLEY, JM ;
MCKENZIE, SE ;
SURREY, S ;
RAPPAPORT, E ;
FORTINA, P .
MOLECULAR AND CELLULAR PROBES, 1995, 9 (03) :145-156
[8]   A 2ND SHORT REPEAT SEQUENCE DETECTED DOWNSTREAM OF RIBOSOMAL-RNA GENES IN THE ENTAMOEBA-HISTOLYTICA RDNA EPISOME [J].
MITTAL, V ;
SEHGAL, D ;
BHATTACHARYA, A ;
BHATTACHARYA, S .
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 1992, 54 (01) :97-100
[9]  
Mittal V, 1992, Arch Med Res, V23, P17
[10]  
NIKIFOROV TT, 1994, PCR METH APPL, V3, P285