Dynamic model of Escherichia coli tryptophan operon shows an optimal structural design

被引:26
作者
Bhartiya, S
Rawool, S
Venkatesh, KV [1 ]
机构
[1] Indian Inst Technol, Dept Chem Engn, Bombay 400076, Maharashtra, India
[2] Indian Inst Technol, Sch Biosci & Bioengn, Bombay 400076, Maharashtra, India
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 2003年 / 270卷 / 12期
关键词
trp operon; transcriptional control; dynamic modeling; tryptophan; feedback repression;
D O I
10.1046/j.1432-1033.2003.03641.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A mathematical model has been developed to study the effect of external tryptophan on the trp operon. The model accounts for the effect of feedback repression by tryptophan through the Hill equation. We demonstrate that the trp operon maintains an intracellular steady-state concentration in a fivefold range irrespective of extracellular conditions. Dynamic behavior of the trp operon corresponding to varying levels of extracellular tryptophan illustrates the adaptive nature of regulation. Depending on the external tryptophan level in the medium, the transient response ranges from a rapid and underdamped to a sluggish and highly overdamped response. To test model fidelity, simulation results are compared with experimental data available in the literature. We further demonstrate the significance of the biological structure of the operon on the overall performance. Our analysis suggests that the tryptophan operon has evolved to a truly optimal design.
引用
收藏
页码:2644 / 2651
页数:8
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