The age of Alu subfamilies

被引:242
作者
Kapitonov, V
Jurka, J
机构
[1] LINUS PAULING INST SCI & MED,PALO ALTO,CA 94306
[2] INST CYTOL & GENET,NOVOSIBIRSK 630090,RUSSIA
关键词
Alu repeats; subfamilies; repetitive DNA; molecular evolution; primates;
D O I
10.1007/BF00163212
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Using Kimura's distance measure we have calculated the average age of all major Alu subfamilies based on the most recent available data. We conclude that AluJ sequences are some 26 Myr older than previously thought. Furthermore, the origin of the FLA (Free Left Arm) Alu family can be traced back to the very beginning of the mammalian radiation. One new minor subfamily is reported and discussed in the context of sequence diversity in major Alu subfamilies.
引用
收藏
页码:59 / 65
页数:7
相关论文
共 37 条
[1]   STRUCTURE AND VARIABILITY OF RECENTLY INSERTED ALU FAMILY MEMBERS [J].
BATZER, MA ;
KILROY, GE ;
RICHARD, PE ;
SHAIKH, TH ;
DESSELLE, TD ;
HOPPENS, CL ;
DEININGER, PL .
NUCLEIC ACIDS RESEARCH, 1990, 18 (23) :6793-6798
[2]  
BATZER MA, 1995, IN PRESS J MOL EVOL
[3]   SOURCES AND EVOLUTION OF HUMAN ALU REPEATED SEQUENCES [J].
BRITTEN, RJ ;
BARON, WF ;
STOUT, DB ;
DAVIDSON, EH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (13) :4770-4774
[4]   EVOLUTIONARY SELECTION AGAINST CHANGE IN MANY ALU REPEAT SEQUENCES INTERSPERSED THROUGH PRIMATE GENOMES [J].
BRITTEN, RJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (13) :5992-5996
[5]   EVIDENCE THAT MOST HUMAN ALU SEQUENCES WERE INSERTED IN A PROCESS THAT CEASED ABOUT 30 MILLION YEARS AGO [J].
BRITTEN, RJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (13) :6148-6150
[6]   RATES OF DNA-SEQUENCE EVOLUTION DIFFER BETWEEN TAXONOMIC GROUPS [J].
BRITTEN, RJ .
SCIENCE, 1986, 231 (4744) :1393-1398
[7]   STRUCTURE OF THE RAT GENE ENCODING THE MITOCHONDRIAL BENZODIAZEPINE RECEPTOR [J].
CASALOTTI, SO ;
PELAIA, G ;
YAKOVLEV, AG ;
CSIKOS, T ;
GRAYSON, DR ;
KRUEGER, KE .
GENE, 1992, 121 (02) :377-382
[8]   REPEAT SEQUENCE FAMILIES DERIVED FROM MAMMALIAN TRANSFER-RNA GENES [J].
DANIELS, GR ;
DEININGER, PL .
NATURE, 1985, 317 (6040) :819-822
[9]   RECENTLY AMPLIFIED ALU FAMILY MEMBERS SHARE A COMMON PARENTAL ALU SEQUENCE [J].
DEININGER, PL ;
SLAGEL, VK .
MOLECULAR AND CELLULAR BIOLOGY, 1988, 8 (10) :4566-4569
[10]  
DEININGER PL, 1993, EVOL BIOL, V27, P157