Complete Genome Sequence of the Proteolytic Clostridium botulinum Type A5 (B3′) Strain H04402 065

被引：23

作者：

Carter, Andrew T. ^{[1
]}

Pearson, Bruce M. ^{[1
]}

Crossman, Lisa C. ^{[2
]}

Drou, Nizar ^{[2
]}

Heavens, Darren ^{[2
]}

Baker, David ^{[2
]}

Febrer, Melanie ^{[2
]}

Caccamo, Mario ^{[2
]}

Grant, Kathie A. ^{[3
]}

Peck, Michael W. ^{[1
]}

机构：

[1] Inst Food Res, Norwich NR4 7UA, Norfolk, England

[2] Genome Anal Ctr, Norwich, Norfolk, England

[3] HPA Microbiol Serv Div, London, England

来源：

JOURNAL OF BACTERIOLOGY | 2011年 / 193卷 / 09期

基金：

英国生物技术与生命科学研究理事会;

关键词：

GENES;

D O I：

10.1128/JB.00072-11

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

H04402 065 is one of a very small group of strains of proteolytic Clostridium botulinum that form type A5 neurotoxin. Here, we report the complete 3.9-Mb genome sequence and annotation of strain H04402 065, which was isolated from a botulism patient in the United Kingdom in 2004.

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收藏

页码：2351 / 2352

页数：2

相关论文

共 13 条

[1]

Akbulut D, 2005, Euro Surveill, V10, P5, DOI 10.2807/esm.10.09.00561-en

[2] The RAST server: Rapid annotations using subsystems technology [J].

Aziz, Ramy K. ;

Bartels, Daniela ;

Best, Aaron A. ;

DeJongh, Matthew ;

Disz, Terrence ;

Edwards, Robert A. ;

Formsma, Kevin ;

Gerdes, Svetlana ;

Glass, Elizabeth M. ;

Kubal, Michael ;

Meyer, Folker ;

Olsen, Gary J. ;

Olson, Robert ;

Osterman, Andrei L. ;

Overbeek, Ross A. ;

McNeil, Leslie K. ;

Paarmann, Daniel ;

Paczian, Tobias ;

Parrello, Bruce ;

Pusch, Gordon D. ;

Reich, Claudia ;

Stevens, Rick ;

Vassieva, Olga ;

Vonstein, Veronika ;

Wilke, Andreas ;

Zagnitko, Olga .

BMC GENOMICS, 2008, 9 (1)

[3] GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions [J].

Besemer, J ;

Lomsadze, A ;

Borodovsky, M .

NUCLEIC ACIDS RESEARCH, 2001, 29 (12) :2607-2618

[4] Further Characterization of Proteolytic Clostridium botulinum Type A5 Reveals that Neurotoxin Formation Is Unaffected by Loss of the cntR (botR) Promoter Sigma Factor Binding Site [J].

Carter, Andrew T. ;

Mason, David R. ;

Grant, Kathie A. ;

Franciosa, Giovanna ;

Aureli, Paulo ;

Peck, Michael W. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (03) :1012-1013

[5] Independent evolution of neurotoxin and flagellar genetic loci in proteolytic Clostridium botulinum [J].

Carter, Andrew T. ;

Paul, Catherine J. ;

Mason, David R. ;

Twine, Susan M. ;

Alston, Mark J. ;

Logan, Susan M. ;

Austin, John W. ;

Peck, Michael W. .

BMC GENOMICS, 2009, 10

[6] Identifying bacterial genes and endosymbiont DNA with Glimmer [J].

Delcher, Arthur L. ;

Bratke, Kirsten A. ;

Powers, Edwin C. ;

Salzberg, Steven L. .

BIOINFORMATICS, 2007, 23 (06) :673-679

[7] Novel Clostridium botulinum Toxin Gene Arrangement with Subtype A5 and Partial Subtype B3 Botulinum Neurotoxin Genes [J].

Dover, Nir ;

Barash, Jason R. ;

Arnon, Stephen S. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (07) :2349-2350

[8] Phosphonate degradation in microorganisms [J].

Fox, Edward A. ;

Mendz, George L. .

ENZYME AND MICROBIAL TECHNOLOGY, 2006, 40 (01) :145-150

[9] Recombination and insertion events involving the botulinum neurotoxin complex genes in Clostridium botulinum types A, B, E and F and Clostridium butyricum type E strains [J].

Hill, Karen K. ;

Xie, Gary ;

Foley, Brian T. ;

Smith, Theresa J. ;

Munk, Amy C. ;

Bruce, David ;

Smith, Leonard A. ;

Brettin, Thomas S. ;

Detter, John C. .

BMC BIOLOGY, 2009, 7 :66

[10] Clostridium botulinum in the post-genomic era [J].

Peck, Michael W. ;

Stringer, Sandra C. ;

Carter, Andrew T. .

FOOD MICROBIOLOGY, 2011, 28 (02) :183-191