A microarray-based high throughput molecular marker genotyping method: the tagged microarray marker (TAM) approach

被引:41
作者
Flavell, AJ [1 ]
Bolshakov, VN
Booth, A
Jing, R
Russell, J
Ellis, THN
Isaac, P
机构
[1] Univ Dundee, Scottish Crop Res Inst, Plant Res Unit, Dundee DD2 5DA, Scotland
[2] Agrogene Sa, F-77550 Moissy Cramayel, France
[3] John Innes Ctr Plant Sci Res, Dept Crop Genet, Norwich NR4 7UH, Norfolk, England
[4] Scottish Crop Res Inst, Genome Dynam Programme, Dundee DD2 5DA, Scotland
[5] Univ Dundee, Sch Life Sci, Postgenom & Mol Interact Ctr, Dundee DD1 5EH, Scotland
关键词
D O I
10.1093/nar/gng113
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A microarray-based method has been developed for scoring thousands of DNAs for a co-dominant molecular marker on a glass slide. The approach was developed to detect insertional polymorphism of transposons and works well with single nucleotide polymorphism (SNP) markers. Biotin- terminated allele-specific PCR products are spotted unpurified onto streptavidin-coated glass slides and visualised by hybridisation of fluorescent detector oligonucleotides to tags attached to the allele- specific PCR primers. Two tagged primer oligonucleotides are used per locus and each tag is detected by hybridisation to a concatameric DNA probe labelled with multiple fluorochromes.
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页数:8
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