Gene structure and tissue expression of human selenoprotein W, SEPW1, and identification of a retroprocessed pseudogene, SEPW1P

被引:18
作者
Bellingham, J
Gregory-Evans, K
Fox, MF
Gregory-Evans, CY
机构
[1] Univ London Imperial Coll Sci Technol & Med, Fac Med, Sect Cell & Mol Biol, Div Biomed Sci, London SW7 2AZ, England
[2] Charing Cross Hosp, Imperial Coll London, Fac Med,Div Neurosci & Psychol Med, Gene Targeting Unit,Dept Ophthalmol, London W6 8RP, England
[3] MRC, Human Biochem Genet Unit, Galton Lab, London NW1 2HE, England
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION | 2003年 / 1627卷 / 2-3期
关键词
selenoprotein W; pseudogene; tissue expression;
D O I
10.1016/S0167-4781(03)00078-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have determined that the human SEPW1 (selenoprotein W) gene maps to chromosome 19q13.3, spans approximately 6.3 kb and comprises six exons, in contrast to the previously published five exons. The gene lacks canonical TATA and CAAT boxes, but has numerous Sp1 consensus binding sites upstream of multiple transcription start sites. SEPW1 is expressed in all of the 22 tissues assayed, and shows highest expression in skeletal muscle and heart. Additionally, we have also identified a retroprocessed SEPW1 pseudogene, SEPW1P, which maps to chromosome 1p34-35. (C) 2003 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:140 / 146
页数:7
相关论文
共 52 条
  • [1] ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
  • [2] Selenoprotein W of rat muscle binds glutathione and an unknown small molecular weight moiety
    Beilstein, MA
    Vendeland, SC
    Barofsky, E
    Jensen, ON
    Whanger, PD
    [J]. JOURNAL OF INORGANIC BIOCHEMISTRY, 1996, 61 (02) : 117 - 124
  • [3] Bellingham J, 1997, DEGENERATIVE RETINAL DISEASES, P295
  • [4] Microsatellite markers for the cone-rod retinal dystrophy gene, CRX, on 19q13.3
    Bellingham, J
    Gregory-Evans, CY
    Gregory-Evans, K
    [J]. JOURNAL OF MEDICAL GENETICS, 1998, 35 (06) : 527 - 527
  • [5] Sequence and tissue expression of a novel human carbonic anhydrase-related protein, CARP-2, mapping to chromosome 19q13.3
    Bellingham, J
    Gregory-Evans, K
    Gregory-Evans, CY
    [J]. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1998, 253 (02) : 364 - 367
  • [6] LOCALIZATION OF THE HUMAN BONA-FIDE CALMODULIN GENES CALM1, CALM2, AND CALM3 TO CHROMOSOME-14Q24-Q31, CHROMOSOME-2P21.1-P21.3, AND CHROMOSOME-19Q13.2-Q13.3
    BERCHTOLD, MW
    EGLI, R
    RHYNER, JA
    HAMEISTER, H
    STREHLER, EE
    [J]. GENOMICS, 1993, 16 (02) : 461 - 465
  • [7] FUNCTIONAL-CHARACTERIZATION OF THE EUKARYOTIC SECIS ELEMENTS WHICH DIRECT SELENOCYSTEINE INSERTION AT UGA CODONS
    BERRY, MJ
    BANU, L
    HARNEY, JW
    LARSEN, PR
    [J]. EMBO JOURNAL, 1993, 12 (08) : 3315 - 3322
  • [8] Discovery of a functional Retrotransposon of the murine phospholipid hydroperoxide glutathione peroxidase: Chromosomal localization and tissue-specific expression pattern
    Boschan, C
    Borchert, A
    Ufer, C
    Thiele, BJ
    Kuhn, H
    [J]. GENOMICS, 2002, 79 (03) : 387 - 394
  • [9] ACTIVATION OF THE GAMMA-E-CRYSTALLIN PSEUDOGENE IN THE HUMAN HEREDITARY COPPOCK-LIKE CATARACT
    BRAKENHOFF, RH
    HENSKENS, HAM
    VANROSSUM, MWPC
    LUBSEN, NH
    SCHOENMAKERS, JGG
    [J]. HUMAN MOLECULAR GENETICS, 1994, 3 (02) : 279 - 283
  • [10] RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements
    Brosius, J
    [J]. GENE, 1999, 238 (01) : 115 - 134