Vibrational dephasing of carbonmonoxy myoglobin

被引:55
作者
Williams, RB
Loring, RF [1 ]
Fayer, MD
机构
[1] Cornell Univ, Baker Lab, Dept Chem & Chem Biol, Ithaca, NY 14853 USA
[2] Stanford Univ, Dept Chem, Stanford, CA 94305 USA
关键词
D O I
10.1021/jp010798o
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The autocorrelation function of vibrational frequency fluctuations of the CO ligand in carbonmonoxy myoglobin, C-delta delta(t), is computed from molecular dynamics simulations. Electrostatic interactions are assumed to dominate the modulation of the CO vibrational frequency. The simulated C-delta delta(t) is consistent with linear and nonlinear infrared spectroscopic measurements. The short-time decay of Cda is dominated by dynamics of the distal histidine, and of a water molecule that can occupy the heme pocket. Correlated protein and solvent dynamics induce spectral diffusion of the CO frequency on longer time scales.
引用
收藏
页码:4068 / 4071
页数:4
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