On the electronic nature of low-barrier hydrogen bonds in enzymatic reactions

被引:128
作者
Schiott, B
Iversen, BB
Madsen, GKH
Larsen, FK
Bruice, TC [1 ]
机构
[1] Univ Calif Santa Barbara, Dept Chem, Santa Barbara, CA 93106 USA
[2] Aarhus Univ, Dept Chem, DK-8000 Aarhus C, Denmark
关键词
D O I
10.1073/pnas.95.22.12799
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The electronic nature of low-barrier hydrogen bonds (LBHBs) in enzymatic reactions is discussed based on combined low temperature neutron and x-ray diffraction experiments and on high level ab initio calculations by using the model substrate benzoylacetone. This molecule has a LBHB, as the intramolecular hydrogen bond is described by a double-well potential with a small barrier for hydrogen transfer. From an "atoms in molecules" analysis of the electron density, it is found that the hydrogen atom is stabilized by covalent bonds to both oxygens, Large atomic partial charges on the hydrogen-bonded atoms are found experimentally and theoretically. Therefore, the hydrogen bond gains stabilization from both covalency and from the normal electrostatic interactions found for long, weak hydrogen bonds, Based on comparisons with other systems having short-strong hydrogen bonds or LBHBs, it is proposed that all short-strong and LBHB systems possess similar electronic features of the hydrogen-bonded region, namely polar covalent bonds between the hydrogen atom and both heteroatoms in question.
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页码:12799 / 12802
页数:4
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[1]  
Bader RWF., 1990, Atoms in Molecules: A Quantum Theory
[2]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[3]  
BEROLASI V, 1991, J AM CHEM SOC, V13, P4917
[4]   Intramolecular O-H center dot center dot center dot O hydrogen bonds assisted by resonance. Correlation between crystallographic data and H-1 NMR chemical shifts [J].
Bertolasi, V ;
Gilli, P ;
Ferretti, V ;
Gilli, G .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1997, (05) :945-952
[5]   Resonance-assisted O-H center dot center dot center dot O hydrogen bonding: Its role in the crystalline self-recognition of beta-diketone enols and its structural and IR characterization [J].
Bertolasi, V ;
Gilli, P ;
Ferretti, V ;
Gilli, G .
CHEMISTRY-A EUROPEAN JOURNAL, 1996, 2 (08) :925-934
[6]   DETERMINING ATOM-CENTERED MONOPOLES FROM MOLECULAR ELECTROSTATIC POTENTIALS - THE NEED FOR HIGH SAMPLING DENSITY IN FORMAMIDE CONFORMATIONAL-ANALYSIS [J].
BRENEMAN, CM ;
WIBERG, KB .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1990, 11 (03) :361-373
[7]   A new concept for the mechanism of action of chymotrypsin: The role of the low-barrier hydrogen bond [J].
Cassidy, CS ;
Lin, J ;
Frey, PA .
BIOCHEMISTRY, 1997, 36 (15) :4576-4584
[8]   A NEW ROBUST ALGORITHM FOR FULLY AUTOMATED-DETERMINATION OF ATTRACTOR INTERACTION LINES IN MOLECULES [J].
CIOSLOWSKI, J ;
NANAYAKKARA, A .
CHEMICAL PHYSICS LETTERS, 1994, 219 (1-2) :151-154
[9]   VARIATIONAL DETERMINATION OF THE ZERO-FLUX SURFACES OF ATOMS IN MOLECULES [J].
CIOSLOWSKI, J ;
STEFANOV, BB .
MOLECULAR PHYSICS, 1995, 84 (04) :707-716
[10]   AN EFFICIENT EVALUATION OF ATOMIC PROPERTIES USING A VECTORIZED NUMERICAL-INTEGRATION WITH DYNAMIC THRESHOLDING [J].
CIOSLOWSKI, J .
CHEMICAL PHYSICS LETTERS, 1992, 194 (1-2) :73-78