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Filtered backprojection for the reconstruction of a high-resolution (4,2)D CH3-NHNOESY spectrum on a 29 kDa protein
被引:35
作者
:
Coggins, BE
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Coggins, BE
Venters, RA
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Venters, RA
Zhou, P
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Zhou, P
[
1
]
机构
:
[1]
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
[2]
Duke Univ, Med Ctr, NMR Ctr, Durham, NC 27710 USA
来源
:
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
|
2005年
/ 127卷
/ 33期
关键词
:
D O I
:
10.1021/ja053110k
中图分类号
:
O6 [化学];
学科分类号
:
0703 ;
摘要
:
Projection-reconstruction (PR) NMR enables rapid collection of multidimensional NMR data. NOESY represents a particularly difficult challenge for currently existing reconstruction algorithms, as it requires the quantitative reconstruction of an unknown number of peaks, at full sensitivity. We have demonstrated the successful application of PR-NMR to NOESY by determining the 4D methyl/amide NOESY spectrum of a 29 kDa protein, human carbonic anhydrase II, from 2D projections, using filtered backprojection for reconstruction. Compared with a 3D control spectrum, all expected peaks were faithfully reconstructed, with correct volumes and with no artifacts. Filtered backprojection thus provides a way to obtain high-resolution 4D NOESY data in the time required for conventional 3D data collection. Copyright © 2005 American Chemical Society.
引用
收藏
页码:11562 / 11563
页数:2
相关论文
共 13 条
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[Anonymous], 1999, BOOK
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INVERSION OF FAN-BEAM SCANS IN RADIO ASTRONOMY
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;
RIDDLE, AC
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0
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0
RIDDLE, AC
.
ASTROPHYSICAL JOURNAL,
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Generalized reconstruction of n-D NMR spectra from multiple projections:: Application to the 5-D HACACONH spectrum of protein G B1 domain
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Coggins, BE
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0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Coggins, BE
;
Venters, RA
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Venters, RA
;
Zhou, P
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Zhou, P
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2004,
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Global folds of highly deuterated, methyl-protonated proteins by multidimensional NMR
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Gardner, KH
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机构:
UNIV TORONTO, DEPT MED GENET & MICROBIOL, TORONTO, ON M5S 1A8, CANADA
Gardner, KH
;
Rosen, MK
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机构:
UNIV TORONTO, DEPT MED GENET & MICROBIOL, TORONTO, ON M5S 1A8, CANADA
Rosen, MK
;
Kay, LE
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UNIV TORONTO, DEPT MED GENET & MICROBIOL, TORONTO, ON M5S 1A8, CANADA
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Jiang, L
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h-index:
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机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Jiang, L
;
Coggins, BE
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Coggins, BE
;
Zhou, P
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
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机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Kupce, E
;
Freeman, R
论文数:
0
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0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
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2004,
22A
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Fast reconstruction of four-dimensional NMR spectra from plane projections
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Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Freeman, R
.
JOURNAL OF BIOMOLECULAR NMR,
2004,
28
(04)
:391
-395
[8]
Projection-reconstruction of three-dimensional NMR spectra
[J].
Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Varian Ltd, Surrey KT12 2QF, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Varian Ltd, Surrey KT12 2QF, England
Freeman, R
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2003,
125
(46)
:13958
-13959
[9]
Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections
[J].
Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Freeman, R
.
JOURNAL OF BIOMOLECULAR NMR,
2003,
27
(04)
:383
-387
[10]
MUHANDIRAM DR, 1993, J BIOMOL NMR, V3, P463
←
1
2
→
共 13 条
[1]
[Anonymous], 1999, BOOK
[2]
INVERSION OF FAN-BEAM SCANS IN RADIO ASTRONOMY
[J].
BRACEWELL, RN
论文数:
0
引用数:
0
h-index:
0
BRACEWELL, RN
;
RIDDLE, AC
论文数:
0
引用数:
0
h-index:
0
RIDDLE, AC
.
ASTROPHYSICAL JOURNAL,
1967,
150
(2P1)
:427
-+
[3]
Generalized reconstruction of n-D NMR spectra from multiple projections:: Application to the 5-D HACACONH spectrum of protein G B1 domain
[J].
Coggins, BE
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Coggins, BE
;
Venters, RA
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Venters, RA
;
Zhou, P
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Zhou, P
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2004,
126
(04)
:1000
-1001
[4]
Global folds of highly deuterated, methyl-protonated proteins by multidimensional NMR
[J].
Gardner, KH
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV TORONTO, DEPT MED GENET & MICROBIOL, TORONTO, ON M5S 1A8, CANADA
Gardner, KH
;
Rosen, MK
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV TORONTO, DEPT MED GENET & MICROBIOL, TORONTO, ON M5S 1A8, CANADA
Rosen, MK
;
Kay, LE
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV TORONTO, DEPT MED GENET & MICROBIOL, TORONTO, ON M5S 1A8, CANADA
Kay, LE
.
BIOCHEMISTRY,
1997,
36
(06)
:1389
-1401
[5]
Rapid assignment of protein side chain resonances using projection-reconstruction of (4,3)D HC(CCO)NH and intra-HC(C)NH experiments
[J].
Jiang, L
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Jiang, L
;
Coggins, BE
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Coggins, BE
;
Zhou, P
论文数:
0
引用数:
0
h-index:
0
机构:
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
Zhou, P
.
JOURNAL OF MAGNETIC RESONANCE,
2005,
175
(01)
:170
-176
[6]
The Radon transform: A new scheme for fast multidimensional NMR
[J].
Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Freeman, R
.
CONCEPTS IN MAGNETIC RESONANCE PART A,
2004,
22A
(01)
:4
-11
[7]
Fast reconstruction of four-dimensional NMR spectra from plane projections
[J].
Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Freeman, R
.
JOURNAL OF BIOMOLECULAR NMR,
2004,
28
(04)
:391
-395
[8]
Projection-reconstruction of three-dimensional NMR spectra
[J].
Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Varian Ltd, Surrey KT12 2QF, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Varian Ltd, Surrey KT12 2QF, England
Freeman, R
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2003,
125
(46)
:13958
-13959
[9]
Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections
[J].
Kupce, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Kupce, E
;
Freeman, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Univ Cambridge Jesus College, Cambridge CB5 8BL, England
Freeman, R
.
JOURNAL OF BIOMOLECULAR NMR,
2003,
27
(04)
:383
-387
[10]
MUHANDIRAM DR, 1993, J BIOMOL NMR, V3, P463
←
1
2
→