Stereo-Selectivity of Human Serum Albumin to Enantiomeric and Isoelectronic Pollutants Dissected by Spectroscopy, Calorimetry and Bioinformatics

被引:152
作者
Ahmad, Ejaz [1 ]
Rabbani, Gulam [1 ]
Zaidi, Nida [1 ]
Singh, Saurabh [2 ]
Rehan, Mohd [3 ]
Khan, Mohd Moin [1 ]
Rahman, Shah Kamranur [1 ]
Quadri, Zainuddin [1 ]
Shadab, Mohd. [1 ]
Ashraf, Mohd Tashfeen [4 ]
Subbarao, Naidu [3 ]
Bhat, Rajiv [2 ]
Khan, Rizwan Hasan [1 ]
机构
[1] Aligarh Muslim Univ, Interdisciplinary Biotechnol Unit, Aligarh, Uttar Pradesh, India
[2] Jawaharlal Nehru Univ, Sch Biotechnol, New Delhi 110067, India
[3] Jawaharlal Nehru Univ, Sch Computat & Integrat Sci, New Delhi 110067, India
[4] Gautam Buddha Univ, Sch Biotechnol, Greater Noida, India
关键词
ARTIFICIAL PROTEIN; CRYSTAL-STRUCTURE; BINDING SITE; FLUORESCENCE; THERMODYNAMICS; SPECIFICITY;
D O I
10.1371/journal.pone.0026186
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
1-naphthol (1N), 2-naphthol (2N) and 8-quinolinol (8H) are general water pollutants. 1N and 2N are the configurational enantiomers and 8H is isoelectronic to 1N and 2N. These pollutants when ingested are transported in the blood by proteins like human serum albumin (HSA). Binding of these pollutants to HSA has been explored to elucidate the specific selectivity of molecular recognition by this multiligand binding protein. The association constants (K-b) of these pollutants to HSA were moderate (10(4)-10(5) M-1). The proximity of the ligands to HSA is also revealed by their average binding distance, r, which is estimated to be in the range of 4.39-5.37 nm. The binding free energy (Delta G) in each case remains effectively the same for each site because of enthalpy-entropy compensation (EEC). The difference observed between Delta C-p(exp) and Delta C-p(calc) are suggested to be caused by binding-induced flexibility changes in the HSA. Efforts are also made to elaborate the differences observed in binding isotherms obtained through multiple approaches of calorimetry, spectroscopy and bioinformatics. We suggest that difference in dissociation constants of pollutants by calorimetry, spectroscopic and computational approaches could correspond to occurrence of different set of populations of pollutants having different molecular characteristics in ground state and excited state. Furthermore, our observation of enhanced binding of pollutants (2N and 8H) in the presence of hemin signifies that ligands like hemin may enhance the storage period of these pollutants in blood that may even facilitate the ill effects of these pollutants.
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页数:18
相关论文
共 50 条
[1]
KINETICS AND MECHANISM OF THE INTERACTION BETWEEN HUMAN-SERUM ALBUMIN AND MONOMERIC HEMIN [J].
ADAMS, PA ;
BERMAN, MC .
BIOCHEMICAL JOURNAL, 1980, 191 (01) :95-102
[2]
Gold nanorods as nanoadmicelles: 1-naphthol partitioning into a nanorod-bound surfactant bilayer [J].
Alkilany, Alaaldin M. ;
Frey, Rebecca L. ;
Ferry, John L. ;
Murphy, Catherine J. .
LANGMUIR, 2008, 24 (18) :10235-10239
[3]
[Anonymous], PYMOL MOL GRAPHICS S
[4]
Bevington Philip R., DATA REDUCTION ERROR
[5]
Binding of the general anesthetics propofol and halothane to human serum albumin - High resolution crystal structures [J].
Bhattacharya, AA ;
Curry, S ;
Franks, NP .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (49) :38731-38738
[6]
Molecular spectroscopic study on the interaction of tetracyclines with serum albumins [J].
Bi, SY ;
Song, DQ ;
Tian, Y ;
Zhou, X ;
Liu, ZY ;
Zhang, HQ .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2005, 61 (04) :629-636
[7]
A survey of the year 2007 literature on applications of isothermal titration calorimetry [J].
Bjelic, Sasa ;
Jelesarov, Ilian .
JOURNAL OF MOLECULAR RECOGNITION, 2008, 21 (05) :289-311
[8]
Brodersen R, 1982, BILIRUBIN, V1
[9]
INFLUENCE OF INHIBITOR BINDING ON THE INTERNAL MOTIONS OF LYSOZYME [J].
CROSS, AJ ;
FLEMING, GR .
BIOPHYSICAL JOURNAL, 1986, 50 (03) :507-512
[10]
Cyril L, BIOCH HDB