Noise-induced cooperative behavior in a multicell system

被引:81
作者
Chen, LN [1 ]
Wang, RQ
Zhou, TS
Aihara, K
机构
[1] Osaka Sangyo Univ, Dept Elect Engn & Elect, Osaka 5748530, Japan
[2] Tsinghua Univ, Dept Math Sci, Beijing 100084, Peoples R China
[3] Univ Tokyo, Inst Ind Sci, Meguro Ku, Tokyo 1538505, Japan
[4] JST, ERATO Aihara Complex Modelling Project, Shibuya Ku, Tokyo 1510065, Japan
关键词
D O I
10.1093/bioinformatics/bti392
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Motivation: All cell components exhibit intracellular noise on account of random births and deaths of individual molecules, and extracellular noise because of environment perturbations. Gene regulation in particular, is an inherently noisy process with transcriptional control, alternative splicing, translation, diffusion and chemical modification reactions, all of which involve stochastic fluctuations. Such stochastic noises may not only affect the dynamics of the entire system but may also be exploited by living organisms to actively facilitate certain functions, such as cooperative behavior and communication. Results: We have provided a general model and an analytic tool to examine the cooperative behavior of a multicell system with both intracellular and extracellular stochastic fluctuations. A multicell system with a synthetic gene network is adopted to demonstrate the effects of noises and coupling on collective dynamics. These results establish not only a theoretical foundation but also a quantitative basis for understanding essential roles of noises on cooperative dynamics, such as synchronization and communication among cells.
引用
收藏
页码:2722 / 2729
页数:8
相关论文
共 45 条
[1]   GLOBAL BIFURCATIONS OF PHASE-LOCKED OSCILLATORS [J].
ALEXANDER, JC ;
AUCHMUTY, G .
ARCHIVE FOR RATIONAL MECHANICS AND ANALYSIS, 1986, 93 (03) :253-270
[2]   GLOBAL BIFURCATIONS OF PERIODIC ORBITS [J].
ALEXANDER, JC ;
YORKE, JA .
AMERICAN JOURNAL OF MATHEMATICS, 1978, 100 (02) :263-292
[3]   Modelling periodic oscillation of biological systems with multiple timescale networks [J].
不详 .
SYSTEMS BIOLOGY, 2004, 1 (01) :71-84
[4]   Engineering stability in gene networks by autoregulation [J].
Becskei, A ;
Serrano, L .
NATURE, 2000, 405 (6786) :590-593
[5]  
BELTA C, 2001, STABILITY REACHABILI
[6]  
Broeck CVD, 1994, PHYS REV LETT, V73, P3395
[7]   Design of artificial cell-cell communication using gene and metabolic networks [J].
Bulter, T ;
Lee, SG ;
Woirl, WWC ;
Fung, E ;
Connor, MR ;
Liao, JC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (08) :2299-2304
[8]   Dynamics of gene regulatory networks with cell division cycle [J].
Chen, LN ;
Wang, RQ ;
Kobayashi, TJ ;
Aihara, K .
PHYSICAL REVIEW E, 2004, 70 (01) :13
[9]   Stability of genetic regulatory networks with time delay [J].
Chen, LN ;
Aihara, K .
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I-REGULAR PAPERS, 2002, 49 (05) :602-608
[10]   A model of periodic oscillation for genetic regulatory systems [J].
Chen, LN ;
Aihara, K .
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I-REGULAR PAPERS, 2002, 49 (10) :1429-1436