YTHDF2 destabilizes m6A-containing RNA through direct recruitment of the CCR4-NOT deadenylase complex

被引:1437
作者
Du, Hao [1 ,2 ,3 ]
Zhao, Ya [1 ,2 ,3 ]
He, Jinqiu [4 ]
Zhang, Yao [5 ]
Xi, Hairui [1 ,2 ,3 ,6 ]
Liu, Mofang [3 ]
Ma, Jinbiao [4 ]
Wu, Ligang [1 ,2 ,3 ]
机构
[1] Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Biol Sci,Inst Biochem & Cell Biol, State Key Lab Mol Biol,Natl Ctr Prot Sci Shanghai, 320 Yue Yang Rd, Shanghai 200031, Peoples R China
[2] Chinese Acad Sci, CAS Shanghai Sci Res Ctr, Shanghai 201204, Peoples R China
[3] Chinese Acad Sci, Shanghai Inst Biol Sci, Inst Biochem & Cell Biol, Shanghai Key Lab Mol Androl,State Key Lab Mol Bio, Shanghai 200031, Peoples R China
[4] Fudan Univ, Sch Life Sci, Inst Plant Biol,Dept Biochem, State Key Lab Genet Engn,Collaborat Innovat Ctr G, Shanghai 200433, Peoples R China
[5] Shanghai Inst Planned Parenthood Res, Shanghai 200032, Peoples R China
[6] Shanghai Univ, Sch Life Sci, 333 Nanchen Rd, Shanghai 200444, Peoples R China
基金
中国博士后科学基金; 中国国家自然科学基金;
关键词
MESSENGER-RNA; NUCLEAR-RNA; N-6-METHYLADENOSINE; BINDING; PROTEIN; DOMAIN; REVEALS; GENE; RESOLUTION; DECAY;
D O I
10.1038/ncomms12626
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
Methylation at the N6 position of adenosine (m(6)A) is the most abundant RNA modification within protein-coding and long noncoding RNAs in eukaryotes and is a reversible process with important biological functions. YT521-B homology domain family (YTHDF) proteins are the readers of m(6)A, the binding of which results in the alteration of the translation efficiency and stability of m(6)A-containing RNAs. However, the mechanism by which YTHDF proteins cause the degradation of m(6)A-containing RNAs is poorly understood. Here we report that m(6)A-containing RNAs exhibit accelerated deadenylation that is mediated by the CCR4-NOT deadenylase complex. We further show that YTHDF2 recruits the CCR4-NOT complex through a direct interaction between the YTHDF2 N-terminal region and the SH domain of the CNOT1 subunit, and that this recruitment is essential for the deadenylation of m(6)A-containing RNAs by CAF1 and CCR4. Therefore, we have uncovered the mechanism of YTHDF2-mediated degradation of m(6)A-containing RNAs in mammalian cells.
引用
收藏
页数:11
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