Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue

被引:24
作者
Okinaka, Richard T. [1 ,2 ]
Henrie, Melinda [2 ]
Hill, Karen K. [2 ]
Lowery, KristinS. [5 ]
van Ert, Matthew [1 ]
Pearson, Talima [1 ]
Schupp, James [1 ]
Kenefic, Leo [1 ]
Beaudry, Jodi [1 ]
Hofstadler, Steven A. [5 ]
Jackson, Paul J. [2 ,4 ]
Keim, Paul [1 ,2 ,3 ]
机构
[1] No Arizona Univ, Dept Biol Sci, Flagstaff, AZ 86011 USA
[2] Los Alamos Natl Lab, Los Alamos, NM USA
[3] Translat Genom Res Inst, Phoenix, AZ USA
[4] Lawrence Livermore Natl Lab, Livermore, CA USA
[5] Ibis Biosci Inc, Carlsbad, CA USA
关键词
D O I
10.3201/eid1404.070984
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
A small number of conserved canonical single nucleotide polymorphisms (canSNP) that define major phylogenetic branches for Bacillus anthracis were used to place a Sverdlovsk patient's B. anthracis genotype into 1 of 12 subgroups. Reconstruction of the pagA gene also showed a unique SNP that defines a new lineage for B. anthracis.
引用
收藏
页码:653 / 656
页数:4
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