X-ray crystal structure of JNK2 complexed with the p38α inhibitor BIRB796: Insights into the rational design of DFG-out binding MAP kinase inhibitors

被引:30
作者
Kuglstatter, Andreas [1 ]
Ghate, Manjiri [1 ]
Tsing, Stan [1 ]
Villasenor, Armando G. [1 ]
Shaw, David [1 ]
Barnett, Jim W. [1 ]
Browner, Michelle F. [1 ]
机构
[1] Roche Palo Alto, Palo Alto, CA 94304 USA
关键词
JNK2; p38; BIRB796; Protein crystallography; X-ray crystal structure; DFG-out; Protein kinase; Kinase inhibitor; Structure-based drug design; N-TERMINAL KINASES; RHEUMATOID-ARTHRITIS; P38; PATHWAY;
D O I
10.1016/j.bmcl.2010.06.157
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
JNK2 and p38 alpha are closely related mitogen-activated protein kinases that regulate various cellular activities and are considered drug targets for inflammatory diseases. We have determined the X-ray crystal structure of the clinical phase II p38 alpha inhibitor BIRB796 bound to its off-target JNK2. This shows for the first time a JNK subfamily member in the DFG-out conformation. The fully resolved activation loop reveals that BIRB796 inhibits JNK2 activation by stabilizing the loop in a position that does not allow its phosphorylation by upstream kinases. The structure suggests that substituents at the BIRB796 morpholino group and modifications of the t-butyl moiety should further increase the p38a to JNK2 potency ratio. For the design of selective DFG-out binding JNK2 inhibitors, the binding pocket of the BIRB796 tolyl group may have the best potential. (C) 2010 Elsevier Ltd. All rights reserved.
引用
收藏
页码:5217 / 5220
页数:4
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