Gaiella occulta gen. nov., sp nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov and Gaiellales ord. nov.

被引:153
作者
Albuquerque, Luciana [2 ]
Franca, Luis [2 ]
Rainey, Fred A. [3 ]
Schumann, Peter [4 ]
Fernanda Nobre, M. [1 ]
da Costa, Milton S. [1 ,5 ]
机构
[1] Univ Coimbra, Dept Life Sci, P-3001401 Coimbra, Portugal
[2] Univ Coimbra, Ctr Neurosci & Cell Biol, P-3004517 Coimbra, Portugal
[3] Louisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
[4] Deutsch Sammlung Mikroorganism Zellkultur GmbH, D-38124 Braunschweig, Germany
[5] BIOCANT Biotechnol Pk, Microbiol Unit, P-3060197 Cantanhede, Portugal
关键词
New taxa; Gaiellales; Gaiellaceae; Gaiella occulta; DEOXYRIBONUCLEIC-ACID; PICOLINYL ESTERS; FATTY-ACIDS; BACTERIUM; RADIATION; STRAINS; LIPIDS; SOIL;
D O I
10.1016/j.syapm.2011.07.001
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Two isolates, with an optimum growth temperature of about 35-37 degrees C and an optimum pH for growth between 6.5 and 7.5, were recovered from a deep mineral water aquifer in Portugal. Strains form rod-shaped cells and were non-motile. These strains were non-pigmented, strictly aerobic, catalase and oxidase positive. Strains F2-233(T) and F2-223 assimilated carbohydrates, organic acids and amino acids. Major fatty acids were novel iso internally branched such as 17:0 iso 10-methyl, 17:0 iso and 15:0 iso 8-methyl. The peptidoglycan contained meso-diaminopimelic acid and menaquinone MK-7 was the major respiratory quinone. Analysis of the 16S rRNA gene shows the strains to cluster with species of the genera Thermoleophilum, Patulibacter, Conexibacter and Solirubrobacter to which they have pairwise sequence similarity in the range 87-88%. Based on 16S rRNA gene sequence analysis, physiological and biochemical characteristics we describe a new species of a novel genus represented by strain F2-233(T) (=CECT 7815(T) = LMG 26412(T)) for which we propose the name Gaiella occulta gen. nov., sp. nov. We also propose that this organism represents a novel family named Gaiellaceae fam. nov. of a novel order named Gaiellales ord. nov. (C) 2011 Elsevier GmbH. All rights reserved.
引用
收藏
页码:595 / 599
页数:5
相关论文
共 23 条
[1]   Meiothermus granaticius sp nov., a new slightly thermophilic red-pigmented species from the Azores [J].
Albuquerque, Luciana ;
Rainey, Fred A. ;
Fernanda Nobre, M. ;
da Costa, Milton S. .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2010, 33 (05) :243-246
[2]   Solirubrobacter ginsenosidimutans sp nov., isolated from soil of a ginseng field [J].
An, Dong-Shan ;
Wang, Liang ;
Kim, Minseok S. ;
Bae, Heon-Meen ;
Lee, Sung-Taik ;
Im, Wan-Taek .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 :2606-2609
[3]   Rubrobacter xylanophilus sp nov: A new thermophilic species isolated from a thermally polluted effluent [J].
Carreto, L ;
Moore, E ;
Nobre, MF ;
Wait, R ;
Riley, PW ;
Sharp, RJ ;
DaCosta, MS .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (02) :460-465
[4]   Rubrobacter taiwanensis sp nov., a novel thermophilic, radiation-resistant species isolated from hot springs [J].
Chen, MY ;
Wu, SH ;
Lin, GH ;
Lu, CP ;
Lin, YT ;
Chang, WC ;
Tsay, SS .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :1849-1855
[5]   Analysis of lipids from extremophilic bacteria [J].
da Costa, Milton S. ;
Nobre, M. Fernanda ;
Wait, Robin .
EXTREMOPHILES, 2006, 35 :127-159
[6]  
Gundlapally S., 2009, INT J SYST EVOL MICR, V59, P87
[7]   Picolinyl esters for the structural determination of fatty acids by GC/MS [J].
Harvey, DJ .
MOLECULAR BIOTECHNOLOGY, 1998, 10 (03) :251-260
[8]   Solirubrobacter soli sp nov., isolated from soil of a ginseng field [J].
Kim, Myung Kyum ;
Na, Ju-Ryun ;
Lee, Tae-Hoo ;
Im, Wan-Taek ;
Soung, Nak-Kyun ;
Yang, Deok-Chun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :1453-1455
[9]  
MACKENZIE SL, 1987, J ASSOC OFF ANA CHEM, V70, P151
[10]   PRECISE MEASUREMENT OF THE G+C CONTENT OF DEOXYRIBONUCLEIC-ACID BY HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY [J].
MESBAH, M ;
PREMACHANDRAN, U ;
WHITMAN, WB .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (02) :159-167