Having a BLAST: Analyzing gene sequence data with BlastQuest

被引：2

作者：

Farmerie, WG ^{[1
]}

Hammer, J ^{[1
]}

Liu, L ^{[1
]}

Schneider, M ^{[1
]}

机构：

[1] Univ Florida, Interdisciplinary Ctr Biotechnol Res, ICBR Mol Serv Div, DNA Sequencing Core, Gainesville, FL 32611 USA

来源：

14TH INTERNATIONAL WORKSHOP ON DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS | 2003年

关键词：

D O I：

10.1109/DEXA.2003.1231995

中图分类号：

TP18 [人工智能理论];

学科分类号：

081104 ; 0812 ; 0835 ; 1405 ;

摘要：

An essential problem for biologists is the processing and evaluation of BLAST results. We advocate the deployment of database technology and describe a user-driven tool, called BlastQuest. BlastQuest provides interactive, Web-enabled query, analysis, and visualization facilities beyond what is possible by current BLAST interfaces. Specifically, the BLAST results are extracted, structured, and stored persistently in a relational database to support a series of built-in analysis operations that can be used to select, filter, and order data from multiple BLAST results efficiently and without referring to the original results. Users have the option to interact with BlastQuest through a forms-based interface.

引用

页码：37 / 41

页数：5

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