Infrared spectroscopic identification of β-thalassemia

被引:48
作者
Liu, KZ
Tsang, KS
Li, CK
Shaw, RA
Mantsch, HH
机构
[1] Natl Res Council Canada, Inst Biodiagnost, Winnipeg, MB R3B 1Y6, Canada
[2] Chinese Univ Hong Kong, Ctr Canc, Prince Wales Hosp, Dept Anat & Cellular Pathol, Hong Kong, Hong Kong, Peoples R China
[3] Chinese Univ Hong Kong, Ctr Canc, Prince Wales Hosp, Dept Pediat, Hong Kong, Hong Kong, Peoples R China
关键词
D O I
10.1373/49.7.1125
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Background: The aim of this study was to investigate the potential of infrared (IR) spectroscopy as a fast and reagent-free adjunct tool in the diagnosis and screening of beta-thalassemia. Methods: Blood was obtained from 56 Patients with beta-thalassemia major, 1 patient with hemoglobin H disease, and 35 age-matched controls. Hemolysates of blood samples were centrifuged to remove stroma. IR absorption spectra were recorded for duplicate films dried from 5 muL of hemolysate. Differentiation between the two groups of hemoglobin spectra was by two statistical methods: an unsupervised cluster analysis and a supervised linear discriminant analysis (LDA). Results: The IR spectra revealed changes in the secondary structure of hemoglobin from beta-thalassemia patients compared with that from controls, in particular, a decreased alpha-helix content, an increased content of parallel and antiparallel beta-sheets, and changes in the tyrosine ring absorption band. The hemoglobin from beta-thalassemia patients also showed an increase in the intensity of the IR bands from the cysteine-SH groups. The unsupervised cluster analysis, statistically separating spectra into different groups according to subtle IR spectral differences, allowed separation of control hemoglobin from beta-thalassemia hemoglobin spectra, based mainly on differences in Protein secondary structure. The supervised LDA method provided 100% classification accuracy for the training set and 98% accuracy for the validation set in partitioning control and beta-thalassemia samples. Conclusion: IR spectroscopy holds promise in the clinical diagnosis and screening of beta-thalassemia. (C) 2003 American Association for Clinical Chemistry.
引用
收藏
页码:1125 / 1132
页数:8
相关论文
共 31 条
[1]  
ALBEN JO, 1980, J BIOL CHEM, V255, P3892
[2]   Global epidemiology of hemoglobin disorders [J].
Angastiniotis, M ;
Modell, B .
COOLEYS ANEMIA: SEVENTH SYMPOSIUM, 1998, 850 :251-269
[3]   SULFHYDRYL GROUPS IN HEMOGLOBIN - A NEW MOLECULAR PROBE AT ALPHA-1-BETA-1 INTERFACE STUDIED BY FOURIER-TRANSFORM INFRARED SPECTROSCOPY [J].
BARE, GH ;
ALBEN, JO ;
BROMBERG, PA .
BIOCHEMISTRY, 1975, 14 (08) :1578-1583
[4]  
BUNN HG, 1986, HEMOGLOBIN MOL GENET, P46
[5]  
Clarke GM, 2000, CLIN CHEM, V46, P1284
[6]  
DONG AC, 1994, METHOD ENZYMOL, V232, P139
[7]  
ELANTRI S, 1989, EUR J BIOCHEM, V179, P165
[8]  
Fucharoen S, 1999, Southeast Asian J Trop Med Public Health, V30 Suppl 3, P90
[9]  
Fucharoen S, 1998, CLIN CHEM, V44, P740
[10]   FT-IR DIFFERENCE SPECTROSCOPY OF HEMOGLOBINS-A AND KEMPSEY - EVIDENCE THAT A KEY QUATERNARY INTERACTION INDUCES PROTONATION OF ASP-BETA-99 [J].
GREGORIOU, VG ;
JAYARAMAN, V ;
HU, XH ;
SPIRO, TG .
BIOCHEMISTRY, 1995, 34 (20) :6876-6882