The genome of a motile marine Synechococcus

被引:521
作者
Palenik, B [1 ]
Brahamsha, B
Larimer, FW
Land, M
Hauser, L
Chain, P
Lamerdin, J
Regala, W
Allen, EE
McCarren, J
Paulsen, I
Dufresne, A
Partensky, F
Webb, EA
Waterbury, J
机构
[1] Univ Calif San Diego, Scripps Inst Oceanog, Div Marine Biol Res, La Jolla, CA 92093 USA
[2] Oak Ridge Natl Lab, Oak Ridge, TN 37831 USA
[3] Joint Genome Inst, Walnut Creek, CA 94598 USA
[4] Lawrence Livermore Natl Lab, Livermore, CA 94550 USA
[5] TIGR, Rockville, MD 20850 USA
[6] CNRS, Biol Stn, UMR 7127, F-29682 Roscoff, France
[7] Woods Hole Oceanog Inst, Dept Biol, Woods Hole, MA 02543 USA
基金
美国国家航空航天局; 美国国家科学基金会;
关键词
D O I
10.1038/nature01943
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Marine unicellular cyanobacteria are responsible for an estimated 20-40% of chlorophyll biomass and carbon fixation in the oceans(1). Here we have sequenced and analysed the 2.4-megabase genome of Synechococcus sp. strain WH8102, revealing some of the ways that these organisms have adapted to their largely oligotrophic environment. WH8102 uses organic nitrogen and phosphorus sources and more sodium-dependent transporters than a model freshwater cyanobacterium. Furthermore, it seems to have adopted strategies for conserving limited iron stores by using nickel and cobalt in some enzymes, has reduced its regulatory machinery (consistent with the fact that the open ocean constitutes a far more constant and buffered environment than fresh water), and has evolved a unique type of swimming motility. The genome of WH8102 seems to have been greatly influenced by horizontal gene transfer, partially through phages. The genetic material contributed by horizontal gene transfer includes genes involved in the modification of the cell surface and in swimming motility. On the basis of its genome, WH8102 is more of a generalist than two related marine cyanobacteria(2).
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页码:1037 / 1042
页数:6
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