Experiments and strategies for the assignment of fully 13C/15N-labelled polypeptides by solid state NMR

被引:106
作者
Straus, SK [1 ]
Bremi, T [1 ]
Ernst, RR [1 ]
机构
[1] ETH Zentrum, Chem Phys Lab, CH-8092 Zurich, Switzerland
基金
加拿大自然科学与工程研究理事会;
关键词
assignment; fully C-13/N-15-labelled biomolecules; heteronuclear correlation; homonuclear decoupling; resolution enhancement; solid state NMR;
D O I
10.1023/A:1008280716360
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
High-resolution heteronuclear NMR correlation experiments and strategies are proposed for the assignment of fully C-13/N-15-labelled polypeptides in the solid state. By the combination of intra-residue and inter-residue C-13-N-15 correlation experiments with C-13-C-13 spin-diffusion studies, it becomes feasible to partially assign backbone and side-chain resonances in solid proteins. The performance of sequences using N-15 instead of C-13 detection is evaluated regarding sensitivity and resolution for a labelled dipeptide (L-Val-L-Phe). The techniques are used for a partial assignment of the N-15 and C-13 resonances in human ubiquitin.
引用
收藏
页码:39 / 50
页数:12
相关论文
共 42 条
[1]   NUCLEAR CROSS-RELAXATION INDUCED BY SPECIMEN ROTATION [J].
ANDREW, ER ;
BRADBURY, A ;
EADES, RG ;
WYNN, VT .
PHYSICS LETTERS, 1963, 4 (02) :99-100
[2]   Efficient N-15-C-13 polarization transfer by adiabatic-passage Hartmann-Hahn cross polarization [J].
Baldus, M ;
Geurts, DG ;
Hediger, S ;
Meier, BH .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1996, 118 (01) :140-144
[3]  
BALDUS M, 1997, UNPUB J CHEM PHYS
[4]   H-1-H-1 CORRELATION VIA ISOTROPIC MIXING OF C-13 MAGNETIZATION, A NEW 3-DIMENSIONAL APPROACH FOR ASSIGNING H-1 AND C-13 SPECTRA OF C-13-ENRICHED PROTEINS [J].
BAX, A ;
CLORE, GM ;
GRONENBORN, AM .
JOURNAL OF MAGNETIC RESONANCE, 1990, 88 (02) :425-431
[5]   HETERONUCLEAR DECOUPLING IN ROTATING SOLIDS [J].
BENNETT, AE ;
RIENSTRA, CM ;
AUGER, M ;
LAKSHMI, KV ;
GRIFFIN, RG .
JOURNAL OF CHEMICAL PHYSICS, 1995, 103 (16) :6951-6958
[6]  
Cavanagh J., 1996, PROTEIN NMR SPECTROS
[7]   ASSIGNMENT OF THE SIDE-CHAIN H-1 AND C-13 RESONANCES OF INTERLEUKIN-1-BETA USING DOUBLE-RESONANCE AND TRIPLE-RESONANCE HETERONUCLEAR 3-DIMENSIONAL NMR-SPECTROSCOPY [J].
CLORE, GM ;
BAX, A ;
DRISCOLL, PC ;
WINGFIELD, PT ;
GRONENBORN, AM .
BIOCHEMISTRY, 1990, 29 (35) :8172-8184
[8]   ROTOR-DRIVEN SPIN DIFFUSION IN NATURAL-ABUNDANCE C-13 SPIN SYSTEMS [J].
COLOMBO, MG ;
MEIER, BH ;
ERNST, RR .
CHEMICAL PHYSICS LETTERS, 1988, 146 (3-4) :189-196
[9]  
Croasmun W. R., 1994, 2 DIMENSIONAL NMR SP
[10]   Amino-acid-type identification for deuterated proteins with a beta-carbon-edited HNCOCACB experiment [J].
Dotsch, V ;
Matsuo, H ;
Wagner, G .
JOURNAL OF MAGNETIC RESONANCE SERIES B, 1996, 112 (01) :95-100