The MUSC DNA microarray database

被引：11

作者：

Argraves, GL

Barth, JL

Argraves, WS

机构：

[1] Med Univ S Carolina, Dept Cell Biol, Charleston, SC 29425 USA

[2] Array Genet Inc, Newtown, CT 06482 USA

来源：

BIOINFORMATICS | 2003年 / 19卷 / 18期

关键词：

D O I：

10.1093/bioinformatics/btg325

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

The Medical University of South Carolina (MUSC) DNA Microarray Database is a web-accessible archive of DNA microarray data. The database was developed using the DNA microarray project/data management system, muArrayDB. Annotations for each DNA microarray project and associated cRNA target information are stored in a MySQL relational database and linked to array hybridization data (raw and normalized). At the discretion of investigators, data are placed into the public domain where they can be interrogated and downloaded through a web browser. In addition to serving as an online resource of gene expression data, the MUSC DNA Microarray Database is a model for other academic DNA microarray data repositories.

引用

页码：2473 / 2474

页数：2

共 5 条

[1] A guide to microarray experiments - an open letter to the scientific journals [J].

Ball, CA ;

Sherlock, G ;

Parkinson, H ;

Rocca-Sera, P ;

Brooksbank, C ;

Causton, HC ;

Cavalieri, D ;

Gaasterland, T ;

Hingamp, P ;

Holstege, F ;

Ringwald, M ;

Spellman, P ;

Stoeckert, CJ ;

Stewart, JE ;

Taylor, R ;

Brazma, A ;

Quackenbush, J .

LANCET, 2002, 360 (9338) :1019-1019

[2] Minimum information about a microarray experiment (MIAME) - toward standards for microarray data [J].

Brazma, A ;

Hingamp, P ;

Quackenbush, J ;

Sherlock, G ;

Spellman, P ;

Stoeckert, C ;

Aach, J ;

Ansorge, W ;

Ball, CA ;

Causton, HC ;

Gaasterland, T ;

Glenisson, P ;

Holstege, FCP ;

Kim, IF ;

Markowitz, V ;

Matese, JC ;

Parkinson, H ;

Robinson, A ;

Sarkans, U ;

Schulze-Kremer, S ;

Stewart, J ;

Taylor, R ;

Vilo, J ;

Vingron, M .

NATURE GENETICS, 2001, 29 (04) :365-371

[3]

Gardiner-Garden M, 2001, Brief Bioinform, V2, P143, DOI 10.1093/bib/2.2.143

[4]

Spellman PT, 2002, GENOME BIOL, V3

[5] Microarray databases: standards and ontologies [J].

Stoeckert, CJ ;

Causton, HC ;

Ball, CA .

NATURE GENETICS, 2002, 32 (Suppl 4) :469-473

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